Castor canadensis (American beaver): 109681966
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Entry
109681966 CDS
T04791
Symbol
Ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccan03009
]
109681966 (Ddx54)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109681966 (Ddx54)
Ribosome biogenesis [BR:
ccan03009
]
Eukaryotic type
Pre-60S particles
Helicases
109681966 (Ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
109681966
NCBI-ProteinID:
XP_020012522
UniProt:
A0A250YLI6
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MAVGTRAATGGPLPRAAMAAWRKKKGLRKRRGAASQARDSDSEGGEFEIQAEDDARARKL
GPGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVP
TPIQRKAIPAVLDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELA
LQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQ
SVEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKMLVEFARAGLTEPVLI
RLDVDAKLNDQLKTSFLLVREDTKAAVLLYLLRNVVRPQDQTVVFVATKHHAEYLTELLA
AQRVSCTHIYSALDQTARKINLARFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKG
KLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSLTLARPHEETPGAVGVDGV
LGRVPQSVVDDEDGGLRNTLEVSLELQGLGRVAGNAQQQYVRSRPAPSPESIKRAKELDL
ASLGLHPLFSSRFEEAELQRLRLVDSIKNYRARTTIFEINASSRDPSSQMMRAKRQKDRK
AIASFQQGRQKRQEGLAGPAPGSLAPQKKRPEEEEEEENAGESVEDVFTEVVGQKRQRPG
PDKGAKRRREEVWQRDQEFYVPYRPKDFDSERGLSVGGAGGAFEQQVAGAVLDLMGDEAQ
NLTRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRD
SEEEGTSGQRGPMRRSGRQGRGQAPAGAPAGHVRSELKTKQQILKQRRRTQKMRFLQRGG
LKQLSARNRRRAQELRQGAFGRGAPSKKGKMRKRM
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcggttggcacgcgcgcggcgacaggcggaccgctgccgcgagctgccatggctgca
tggagaaagaaaaaggggctccgcaagcgtcggggcgcggcctcccaggcccgcgacagc
gattcggagggcggcgagtttgagatccaggcggaggatgacgcacgggcgcgaaagctg
gggcctggcagacccctgcctactttccccacctccgaatgcacctcggatgtggagccg
gacacccgggagatggtgcgagcccagaacaagaagaagaagaagtctggaggcttccag
tccatgggactgagctaccctgtgttcaaaggcgtcatgaagaagggctacaaggtgccg
acgcccatccagaggaaggccatccccgcggtcctggacggcaaggacgtggtggctatg
gcgcggacgggcagtggcaagacggcctgcttcctccttcccatgttcgagcgtctcaag
gcccgcagtgcccagacgggggctcgggccctcatcctctcgcctacccgggagctggcc
ttgcagaccatgaagttcacgaaggagctgggcaagttcactggcctcaagacagccctg
atcttgggcggggacaaaatggaagaccagtttgcagccctgcacgaaaatcctgacata
atcattgctacccctgggcggttggtgcatgtggccgtggagatgaacttgaagctgcag
agcgtggagtacgtggtgtttgatgaagctgacaggctctttgaaatgggctttgccgag
caacttcaggagatcataggccgcctccctgggggccaccagacagtgctcttctctgcc
acgctgcccaagatgctggtggagtttgcccgagcaggcctcacggagcctgtgcttatt
cggctggatgtagacgccaagctcaacgatcagctcaagacctcctttctcctggtgcgg
gaagacaccaaggctgctgtgctgctgtacctgctacgcaacgtggtgcggccccaggac
cagacggtggtgtttgtggccacgaagcatcatgcagagtacctcacagagctgctggcg
gcacagcgggtgagctgcacccacatctacagtgccctggaccagacggcccgcaagatc
aacctcgccaggttcacgcacggcaagtgctctgccctcatcgtgaccgacctggctgcc
cgtggcctggacatcccgctgctggacaatgtcatcaactacagcttccccgccaagggc
aagctcttcctgcaccgcgtgggccgtgtggcccgggctggccgaagtggcacagcctac
tccttggtggcaccagacgaggtcccctatctgctggacctgcacctgttcctgggccga
tcccttaccctcgcccgaccgcatgaggaaaccccaggtgctgttggtgtggatggggtg
ctgggccgcgtgccgcagagcgtggtggatgacgaggatggtgggctgcggaacacactg
gaggtgtcgctggagctacagggcctgggccgcgtggccggcaatgcacagcagcagtac
gtgcgctcccggccggcgccctcgcccgagtccatcaagagagccaaggagctggacctg
gccagtctaggcctgcaccccctcttcagctcaagatttgaagaggcggagctgcagcgg
ctgcggcttgtggacagcattaagaactaccgtgctcggacaaccatctttgagatcaac
gcctccagccgggacccaagcagccagatgatgcgtgccaagcggcaaaaggaccgtaaa
gccatcgccagcttccaacaggggcggcagaagcgacaggaaggtctggctggccctgcc
ccaggcagcctggctccacagaagaagcggcctgaagaggaggaggaggaggagaatgct
ggagagagtgtggaggatgtcttcacagaggtcgtgggccagaagcggcagaggccagga
cctgacaaaggagccaagaggcggagggaggaggtctggcagcgggaccaggagttctac
gtgccctaccggcccaaggactttgacagtgagcggggcctgagtgtcggtggggccggg
ggagcctttgagcagcaggtggctggtgccgtcctggacctgatgggggacgaggcgcaa
aacctgaccagaggccggcagcagctcaagtgggaccggaagaaaaagcggtttgtggga
caatcgggacaagaggacaagaagaagatcaaaactgagagtggccgctacatcagcagc
tcctacaagcgggacctctaccagaagtggaagcagaaacagaaaattgatgatcgggac
tcagaggaagaagggacgtctggccagcgcggccctatgcgaagaagtggcaggcaaggg
cgtggccaagctcctgccggcgccccagcaggccatgtgcgatctgagctcaagaccaag
cagcagatcttgaagcagcggcgccggacccagaaaatgcgcttcctgcagcgcgggggc
ctcaagcaactctctgcccgcaaccgccgccgggcccaggagctgcggcagggcgccttc
ggccggggcgccccctccaagaagggcaagatgaggaagaggatgtaa
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