Castor canadensis (American beaver): 109682022 Help Entry 109682022         CDS       T04791                                  Symbol Fdft1 Name (RefSeq) squalene synthase   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism ccan  Castor canadensis (American beaver) Pathway ccan00100   Steroid biosynthesis ccan01100   Metabolic pathways Module ccan_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:ccan00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     109682022 (Fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:ccan01006]     109682022 (Fdft1) Enzymes [BR:ccan01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      109682022 (Fdft1) Prenyltransferases [BR:ccan01006]  Terpene biosynthesis   Squalene/phytoene synthase    109682022 (Fdft1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SQS_PSY Octopine_DH Motif Other DBs NCBI-GeneID:  109682022 NCBI-ProteinID:  XP_020012588 UniProt:  A0A8B7TYF9 LinkDB All DBs Position Unknown AA seq 473 aa AA seqDB search MEEKLLGDSPMAVATCGTKAMSLFKRTFVLSPVTAPRGSGGPPRGCPLPPTAWSSKDWCR LRSPVVGCLPQPHSSSSASPTALCVLCSQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGE MRHAVCIFYLVLRALDTLEDDMSISVEKKIPLLHNFHTFLYEPEWRFMESKEKHRQVLED FPTISLEFRNLAEKYQTVIANICQKMGFGMAEFLVNDMISKQDWDKYCHYVAGLVGIGLS QLFSASEFEDPIVGEDTELANSVALLLQKTNIIRDYLEDCQEGRVFWPKEVWGRYVKKLG DFAKPENVDVAVQCMNELITSALSHIPDVITYLSRLRNQTVFNFCAIPQVMAIATLAACY NNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPNSDPSSSKTRQIIS TIRTQNLPNCQMISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH NT seq 1422 nt NT seq  +upstreamnt  +downstreamnt atggaggaaaagctcctgggcgattcccccatggcagtagctacctgtggcaccaaggcc atgtcgctcttcaaacgcactttcgtgctgagtcctgtcactgcgcccaggggttccggc ggccccccgcgtggctgccccttgcctcccactgcctggtcctccaaggattggtgtcgg ctgcggagccccgtggtcggctgcctgccccagccccactccagctcctccgcgtcgccc accgccctgtgtgttctctgctcgcaggactcgctcagcagcagcttgaaaacttgctac aagtatctgaatcagaccagtcgcagcttcgcagctgttatccaggcgctggatggggaa atgcgccatgcagtatgtatattttacctggttctccgagctctggacactctggaagac gatatgtccatcagtgtggagaagaagatcccactgttgcacaactttcacactttcctt tacgaaccagaatggcgattcatggagagcaaggagaagcatcgacaagtgttggaggac ttccccacgatctccctggaatttagaaatctggctgagaaatatcaaacagtgattgct aacatttgccagaaaatgggatttggtatggcagaatttttagtaaatgatatgatctcc aaacaggattgggacaagtactgtcactatgttgctggcctggtgggaattggcctttct caactgttctcggcctcagagtttgaagaccccatagttggtgaagatacagagctagcc aattcagtggccctgttgctgcagaaaacaaacatcattcgtgattatctggaagactgc caagaaggaagagtgttttggcctaaagaggtttggggcagatacgtgaagaagctgggg gattttgccaagccagagaatgttgatgtagccgtgcagtgcatgaatgaactcataacc agtgctctgagccacatccctgatgtcattacctacctgtccagactccggaaccagact gtgtttaacttctgtgctattccgcaggtaatggccattgctaccttggctgcctgttac aataaccagcaggtgttcaaaggagtcgtgaagatccggaaggggcaagcggttacccta atgatggatgcaaccaacatgccagctgtcaaagctataatatatcagtatatggaagag atttatcacagaatccccaactcggacccatcttctagtaaaacaaggcaaatcatctcc acgatcaggacacagaatcttcccaactgtcagatgatctcccgaagccactattccccc atctacctgtcctttgtcatgctcttggctgccctgagctggcagtacctgagcaccctg tcccaggtcacagaagactatgtccagactggagaacactga

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