KEGG   Castor canadensis (American beaver): 109682120
Entry
109682120         CDS       T04791                                 
Symbol
Cdc5l
Name
(RefSeq) cell division cycle 5-like protein isoform X1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109682120 (Cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccan03041]
    109682120 (Cdc5l)
   03400 DNA repair and recombination proteins [BR:ccan03400]
    109682120 (Cdc5l)
Spliceosome [BR:ccan03041]
 Complex B
  Other components
   Prp19 complex
    109682120 (Cdc5l)
 Complex C
   Prp19-CDC5 complex
    109682120 (Cdc5l)
DNA repair and recombination proteins [BR:ccan03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109682120 (Cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 109682120
NCBI-ProteinID: XP_020012747
UniProt: A0A250YLF5
LinkDB
Position
Unknown
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPASQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA
EGLTPRSGTTPKPVTNSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRMGL
LGLPAPKNDFEIVLPENAEKELEEREVDDTYIEDAADVDARKQAIREAERVKEMKRMHKA
VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
KAVGFGANNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER
EKELQQRYADLLLEKETLQSKL
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgcctcgaattatgatcaaaggaggcgtgtggaggaataccgaggatgaaattctgaaa
gcagcggtaatgaaatatgggaaaaaccagtggtctaggattgcctcgctgctgcatagg
aaatcagcaaaacagtgcaaagccagatggtatgaatggttggatccaagcattaaaaaa
acagagtggtccagagaagaggaggaaaaactcttgcacttggctaagttgatgccaact
cagtggaggaccattgcaccaatcattggaagaacagcagcccagtgcttggaacactat
gaatttctcctagacaaaactgcccaaagggacaatgaagaggaaacaacagatgatcca
cgaaaacttaaacctggagaaatagatccaaatccagaaacaaaaccagcccggcctgat
ccaattgatatggatgaggatgaacttgagatgctttctgaagctagagcccgcctggct
aatactcagggaaagaaggccaagagaaaagcaagagagaaacagctggaagaagcaagg
cgtcttgctgcccttcagaaaagaagagaacttcgagcagctggcatagaaattcagaag
aaaagaaaaaagaagagaggagttgattataatgctgaaattccctttgaaaaaaaacct
gctcttggtttttatgatacatctgaggaaaactaccaggcccttgatgcagatttcaga
aaattaagacagcaggatcttgatggggagctaagatctgaaaaagaaggaagagataga
aaaaaagataaacagcatttgaaaaggaagaaagaatctgacttaccatcagctattctt
caaactagtggtgtttctgaatttactaaaaagagaagcaaactagtacttcctgctcct
cagatttcagatgcggaactccaggaagttgtaaaagtaggccaagcaagtgaaattgca
cgtcaaaccgctgaggaatccggcataacaaactctgcttccagcactctcttgtctgag
tacaacgtcaccaacaacagcattgctctcagaacaccacgaacaccagcttcccaggac
agaattctgcaggaagcccagaacctcatggccttgaccaacgtggacaccccattaaaa
ggtggacttaataccccattgcatgagagtgacttctctggtgtgactccacagcggcaa
gttgtacagacaccaaacacagttctttctaccccattcaggactccttccaacggagct
gaagggctgactccccggagtggaacaacccccaagccagtcaccaactccaccccaggt
agaacaccactcagagacaagttaaacattaatccagaggatggaatggcagactacagt
gatccgtcttatgtgaagcagatggaaagagaatcccgtgaacatctccgtatggggttg
ttgggccttcctgcccctaagaatgattttgaaattgttctaccagaaaatgctgagaag
gagctggaagaacgtgaagtagatgatacttacattgaagatgccgctgacgtggatgct
cgcaaacaggccatacgagaagctgagcgtgtaaaagaaatgaaacgaatgcacaaggct
gtccagaaagatttgccaaggccgtcagaagtaaatgaaactattctaagacccttaaat
gtagaaccacctctaacagatctacagaaaagtgaagaactgatcaaaaaagaaatgatc
acgatgcttcattatgaccttctacatcacccttatgaaccatctggaaataaaaaagga
aaagctgtaggatttggagccaataattcagagcacattacctatctggagcataaccct
tatgaaaagttctccaaagaagagctaaaaaaggcccaggatgttctggtgcaagagatg
gaagtggtcaaacaaggaatgagccatggagaactctctagtgaagcttataaccaggtg
tgggaagaatgctacagtcaagttttatatctacctggacagagccgctacacacgggct
aatctagctagcaaaaaggacagaattgaatcacttgaaaaaaggcttgagataaacagg
ggtcacatgacgacagaagccaagagagctgcaaagatggaaaagaagatgaaaatcttg
cttggaggttaccagtctcgtgctatggggctaatgaagcagttgaatgatttatgggac
caaattgagcaggctcacttggagttacgcacttttgaagaactcaagaaacatgaagat
tctgctattccccggaggctagagtgtctgaaagaagatgtgcagcgacagcaggaaaga
gagaaggagcttcagcagagatacgctgatttgctgttggagaaagagaccttacagtca
aaactctga

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