Castor canadensis (American beaver): 109682371
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Entry
109682371 CDS
T04791
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109682371 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109682371 (Vps35)
Membrane trafficking [BR:
ccan04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109682371 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
FerA
CENP-O
Imm5
Motif
Other DBs
NCBI-GeneID:
109682371
NCBI-ProteinID:
XP_020013139
UniProt:
A0A250YL96
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNVLTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcgcctcaggatgagcaagaaaagctcttagatgaagccata
caagctgtgaaggtccagtcattccaaatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgaactccggacttctatgctgtcacca
aagagctactacgaactttatatggctatttctgatgagctgcactacttggaggtctac
ctaacagatgagtttgccaaaggaagaaaagtggcggatctctatgagcttgtgcaatat
gctggaaacatcatcccaaggctctatttgttgatcacagttggtgttgtatatgtcaag
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgtg
cagcatccattgaggggcttatttcttcgaaattaccttcttcaatgtaccagaaacata
ttacctgatgaaggagagccaacagatgaagaaacaactggtgatattagtgattccatg
gattttgtactactcaactttgctgaaatgaacaagctgtgggtgcgaatgcaacatcaa
ggacacagccgagacagagaaaaaagagaacgagaaagacaagaactgagaattttagta
ggaacaaatttggtgcgccttagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttaacaggcatattggaacaagttgtgaattgtagggatgctttggctcaagaa
tatctcatggagtgtattattcaggtttttcctgatgaattccatctccagacgttgaat
ccttttcttcgggcctgtgctgagttacaccaaaatgtgaatgtgaaaaacataatcatt
gctttaattgacaggttagctttatttgcccatcgtgaagatggacctggaatcccagca
gatattaagctttttgatatattttcacaacaagtagccacagtgatacagtctagacaa
gacatgccgtccgaggatgttgtgtctttacaagtctctctcattaatcttgccatgaaa
tgttaccctgatcgtgtggactatgttgataaggttttagaaacaacagtggagatattc
aataagctcaaccttgaacacattgccaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagatacctgttgatacttacaacaatgttttaacagtcttgaaattaaaacat
tttcatccactctttgagtactttgactacgagtccagaaaaagcatgagttgttacgtg
cttagtaatgttctggattataacacagaaattgtctctcaagaccaggtagattccata
atgaatttggtatccaccttgattcaagatcagccggatcaaccagtagaagaccctgat
ccagaagactttgctgatgagcaaagccttgtgggcagattcattcatcttctgcgttct
gatgaccctgatcagcagtacttgattttaaacacagcacgaaaacattttggagctggt
ggaaatcaacggattcgcttcacactgccgcctttggtatttgcagcttatcagttggct
tttcggtacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactatcagtgctttgatcaaagcagagctggcagaattaccc
ctaagactctttcttcaaggagcactagctgctggagaaattggttttgaaaatcatgaa
actgttgcatatgaatttatgtcccaggcattttctctgtatgaagatgaaatcagtgat
tccaaagcacagctagctgccatcaccttgatcattggtacttttgagaggatgaagtgc
ttcagtgaagagaatcatgaacccttgaggactcaatgtgcacttgctgcttccaaactt
ctgaagaaaccagatcagggccgagctgtgagcacctgtgcacatctcttctggtctggc
agaaacacagataaaaatggggaagagcttcatggaggcaagagggtaatggagtgccta
aagaaagctctaaaaatagcaaatcagtgcatggacccctctctacaagtgcagcttttt
atagaaattctgaacagatatatatatttttatgaaaaggaaaatgatgcggtaacaatt
caggttttgaaccagcttatccaaaagattcgagaagatctcccaaatcttgagtccagt
gaagaaacagagcagattaacaaacattttcataacacgctggagcatttgcgcttgagg
cgggaatcaccagagtctgaggggccaatctatgaaggtctcatcctttaa
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