Castor canadensis (American beaver): 109682399
Help
Entry
109682399 CDS
T04791
Symbol
Col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109682399 (Col8a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
109682399
NCBI-ProteinID:
XP_020013181
UniProt:
A0A8B7U1C5
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MAVLPRPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQAPH
MPLVKDGLAMGKELPQMQYGKEYPHLPQYMKEIQPVPRMGKEVVPKKGKVEMPLASLRGE
QGPRGEPGPRGPPGPPGLPGHGIPGVKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKG
EIGPKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGAKGDRGPKGPPGPPGLQGP
KGEKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQG
PIGVPGVQGPPGMPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPK
GDRGVGGVPGALGPRGEKGPVGAPGMGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGVV
GPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGHKGLPGLPGIPGLL
GPKGEPGIPGDQGLQGPPGIPGIAGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGVAG
LHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPEGLGIDGVKPPHV
YGAKKGKNGGPAYEMPAFTAELTSPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGV
YYFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPS
EQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgccccgccctctgcagctgctgggagtgctgctcaccatttccctgagt
tccatcaggctcattcaagctggtgcctactatggaatcaagccgctgccacctcaaatt
cctcctcagatgccaccacaaattccacaataccagcctctgggccagcaagcacctcac
atgccattggtcaaagatggccttgccatgggcaaggagctgccccagatgcagtatggc
aaagagtatccacatctaccccaatatatgaaggaaattcaacctgtgccaagaatgggc
aaggaggtggtacctaagaaaggcaaagtagaaatgccattagccagtttacgaggagaa
caaggtccccgtggagaacctggcccaagaggaccacctgggccccctggtttgccaggt
catgggatacctggagtcaaaggaaaaccaggaccacagggatatccaggagttggaaag
ccaggtatgcctggaatgccagggaagccaggagccatgggaatgccaggggcaaaagga
gaaattggaccaaaaggggaaattgggcctatggggatcccaggcccacaaggacctcca
gggcctcatggacttccaggcattgggaagccaggtgggccagggttgccagggcaacca
ggagcaaagggtgatagaggacccaaaggaccaccaggacctccaggtcttcagggtcct
aaaggagaaaagggctttgggatgccaggtttgcctggtctcaagggtcctccaggtatg
catggccctcctggccctgttggactgccaggagtgggaaaaccaggagtgacaggcttc
cctgggcctcagggccccttggggaagccagggcctccaggggaacctggcccacaaggc
cctattggagtaccaggggttcaaggacctcctgggatgcctggagttggaaagccaggc
caggatggaatccctggccagccaggatttccaggtggcaaaggggagcaagggctgcca
gggcttccaggacctccaggccttccaggagttgggaaaccaggcttcccaggacccaaa
ggtgaccggggtgtagggggtgttcctggagctcttggaccaagaggggagaaaggacca
gtaggtgctcctggaatgggaggtccccctggagagccaggcctgcctggaatcccaggt
ccaatgggtcctccgggtgctattggtttccctggacccaaaggagaaggtggagttgtt
gggccacagggaccaccaggccccaaaggtgagccagggcttcaaggcttcccaggaaag
ccaggtttccttggtgaagtaggtccccctggcatgaggggtttgccaggtcctataggg
cctaagggtgaagctggacataaaggactgccaggactccctggtattccagggctgctt
ggaccaaagggagaaccaggcattccaggggatcagggtctacaaggccccccaggtata
ccagggattgcagggcctagtggtcccatcggaccacctgggattccaggccccaaaggg
gaacctggcctcccagggccccctggattccctggtgtagggaagccaggagtggcagga
cttcatggtcccccagggaagcctggtgcccttggtcctcaaggtcagcctggtcttcct
ggaccccccggccctccaggacccccagggcccccagcagtgatgccccctacaccacca
ccccaaggagagtatctgccagaaggactgggaattgatggtgtgaaaccaccccatgtc
tacggggctaagaaagggaagaatggagggccagcctatgagatgcctgcatttactgcc
gagctgacctcacctttcccaccggtcggggccccggtgaagtttgacaaactgctctat
aatggcagacagaactacaacccacagacgggcatcttcacctgtgaagttccaggcgtc
tactactttgcataccacgttcactgcaaggggggcaacgtgtgggttgctctgttcaag
aacaacgagcccatgatgtatacgtatgacgaatataaaaagggctttctggaccaggca
tctgggagtgctgtactgctgctcaggccgggagaccgggtgttcctccaaatgccctca
gaacaggctgcaggactgtatgctgggcagtatgtacattcctccttttcaggatattta
ttgtatcccatgtaa
DBGET
integrated database retrieval system
