Castor canadensis (American beaver): 109682636
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Entry
109682636 CDS
T04791
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109682636 (Rbm39)
Spliceosome [BR:
ccan03041
]
Common components
Common spliceosomal components
General mRNP proteins
109682636 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
109682636
NCBI-ProteinID:
XP_020013585
UniProt:
A0A250Y2D9
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttataagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaagagaagcaaaagtaaagaaaggaagcgaagtagagat
agagaacggaaaaagagcaaaagccgagaacggaagcgaagtagaagcaaagaaaggaga
cggagccgctcacgaagtcgagatcgcagattccgaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggag
cctattgacaatctaactcctgaagaaagagatgcaaggacagttttctgtatgcagctg
gcagcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgagaatgatttctgatagaaattcacgacgctccaaaggaattgcatatgtggag
tttgtggatgttagctcagtgcctctagcgataggattgaccggtcagcgagttttagga
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatttacaaaaggggagtgctggacctatgcggctttatgtgggctcattacactttaac
ataactgaggatatgcttcggggcatctttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatctaagggatatggatttattacattttccgac
tcagaatgtgccaaaaaggctttggaacaacttaatggatttgaactagcaggaaggcca
atgaaagttggtcatgttactgaacgtactgatgcttctagcgctagttcatttttagac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccaactgatg
gcaagacttgcagagggtactggtttgcagattcctccagcagcacaacaggctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagactgaagcttcagctttagctgcagctgcatctgttcaacca
cttgcaacacagtgtttccagctctctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagatcaaggatgatgtgattgaagaatgcaataaacatggaggtgtt
attcatatttatgtggataaaaattcagctcagggcaatgtgtatgtgaagtgcccgtca
attgctgcagctattgcagccgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctgtttccagattctatgact
gcaacacaactactggttccaagtagacgatga
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