Castor canadensis (American beaver): 109682911
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Entry
109682911 CDS
T04791
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04066
HIF-1 signaling pathway
ccan04137
Mitophagy - animal
ccan04140
Autophagy - animal
ccan04148
Efferocytosis
ccan04659
Th17 cell differentiation
ccan04919
Thyroid hormone signaling pathway
ccan05167
Kaposi sarcoma-associated herpesvirus infection
ccan05200
Pathways in cancer
ccan05205
Proteoglycans in cancer
ccan05208
Chemical carcinogenesis - reactive oxygen species
ccan05211
Renal cell carcinoma
ccan05230
Central carbon metabolism in cancer
ccan05231
Choline metabolism in cancer
ccan05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
109682911 (Hif1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109682911 (Hif1a)
04137 Mitophagy - animal
109682911 (Hif1a)
04148 Efferocytosis
109682911 (Hif1a)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
109682911 (Hif1a)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
109682911 (Hif1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109682911 (Hif1a)
05205 Proteoglycans in cancer
109682911 (Hif1a)
05208 Chemical carcinogenesis - reactive oxygen species
109682911 (Hif1a)
05230 Central carbon metabolism in cancer
109682911 (Hif1a)
05231 Choline metabolism in cancer
109682911 (Hif1a)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
109682911 (Hif1a)
09162 Cancer: specific types
05211 Renal cell carcinoma
109682911 (Hif1a)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
109682911 (Hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109682911 (Hif1a)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109682911 (Hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
109682911
NCBI-ProteinID:
XP_020014075
UniProt:
A0A8B7U8I1
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MASSNLLWKTKNMKLVLLKLTYIYHMSLFFLFFCVLLSRISSERRKEKSRDAARSRRSKE
SEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYL
KALDGFVMVLTDDGDMIYISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNG
PVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYK
KPPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGR
SIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQ
CIVCVNYVVSGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKE
PDALTLLAPAAGDTIISLDFGSSDTETEDQQLEVPIYNDVMFPSSNEKLPNINLAMSPLP
ASETPKPLRSSADPALNQEVALKLEPNSESLELSFTMPQIQDQPASPSDGSTRQSSPEPN
SPSEYCFDVDSDMVNVFKLELVEKLFAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQL
RSFDQLSPLESSSASPQSVSTVTVFQQTQLQEPTINTATPTTDELKTVTKDGMEDIKILI
GSPSPIHVPKETATDTTSQYGDPQSRTASPNRAGKGVIEQTEKSHPRSPNVVSVTLSPRN
TAPEEELNPKILALQNAQRKRKMEHDGSLFQAVGIGALLQQPDDRAATTSLSWKRVKGCK
SSEQNGLEQKTIILIPSDLACRLLGQSMDEAGLPQLTSYDCEVNAPIQGSRNLLQGEELL
RALDQVN
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctaatcttctgtggaaaacaaaaaatatgaaattagttttattgaagcta
acctatatatatcacatgtctcttttcttcctctttttctgtgttttgttaagtaggata
agttctgaacgtcgaaaagagaagtctagagatgcagccagatctcggcgaagcaaggag
tctgaagtgttttacgagctggctcatcagctgccacttccacataatgtgagctcacat
cttgataaggcttctgttatgaggctgaccatcagttatttgcgtgtcaggaaacttcta
gatgctggtgatctggatattgaagatgaaatgaaggcacagatgaactgcttttatttg
aaagccctggatggctttgttatggtgctcacagatgatggcgacatgatttacatttct
gataacgtgaacaaatacatgggcttaactcagtttgaactaactggacacagtgtgttt
gattttactcatccgtgtgaccatgaggaaatgagagaaatgcttacacacagaaatggc
ccagtgaaaaaaggaaaagaacaaaatacacagcggagctttttcctcagaatgaagtgc
accctaactagccgggggagaactatgaacataaagtctgcgacgtggaaggtacttcac
tgcacaggccatattcatgtatatgataccaacagtaaccaacctcagtgtgggtataag
aaaccacccatgacatgcttggtgctgatttgtgaacccattcctcatccatcaaatatc
gaaattcctttagatagtaagacttttcttagtcgacacagtttggatatgaaattttct
tactgtgatgaaagaattactgaattgatgggatacgagccagaagaacttttgggccgt
tcaatttatgagtattatcatgctttggactctgaccatttgaccaaaactcatcatgat
atgtttacgaaaggacaagtaaccacaggacagtacaggatgcttgccaaaagaggtggc
tatgtctgggttgaaactcaagcaactgtcatatataacaccaagaactctcaaccacag
tgcattgtatgtgtgaattatgttgtgagtggtattattcagcacgacttgattttctcc
cttcaacaaacagaatgtgtcctcaaaccagttgaatcttcagatatgaaaatgactcag
ctgttcaccaaagttgaatctgaggatacaagtagcctctttgacaagctcaagaaggaa
cctgatgctttaactctgctggccccagctgctggagacacaatcatatctttagatttt
ggcagcagtgatacagaaactgaagaccaacaacttgaagttccaatttataatgatgta
atgttcccctcatctaatgaaaaattaccgaatataaatttggcaatgtctccattacct
gcttctgaaactccaaagccacttcgaagtagtgctgatcctgcactcaatcaagaagtt
gcactaaaattagaaccaaattcagagtcattggaactttcttttaccatgccccagatt
caggatcagccagcaagtccttctgatggaagcactagacaaagttcacctgagcctaac
agtcccagtgaatattgttttgatgtggatagtgatatggtcaatgtattcaagctggaa
ttggtagagaaactttttgctgaagacacagaagcaaagaatccattttcaactcaggac
actgatttagacttggagatgttggctccctatatcccaatggatgatgatttccagtta
cgttcctttgatcagttgtcaccattagaaagcagttctgcaagccctcaaagtgtgagc
acagttacagtattccagcagactcagctgcaagaacccaccattaacactgccactccc
accactgatgaattaaaaacagtgacaaaagatggtatggaagacattaaaatactgatt
ggatctccgtctcctatccacgtacctaaagaaaccgcaactgacacaacatcacagtat
ggtgatcctcagagtcggacagcctcaccaaacagagcaggaaaaggagtcatagaacag
acagaaaagtctcatccaagaagccctaacgtggtatctgtcactttgagcccaagaaat
actgctcctgaggaagaattaaatccaaagatactggctttgcagaatgctcagagaaag
agaaaaatggaacacgatggctcactttttcaagcagtaggaattggagcattattgcag
caaccagatgatcgtgccgctactacatcgctttcttggaaacgcgtgaaaggatgcaaa
tctagcgaacagaatggattggagcaaaagacaattattttaataccctctgatctagca
tgtagactgctggggcaatcaatggatgaggctggattaccacagctgaccagttatgat
tgtgaagttaatgctcccatacaaggcagcagaaacctactgcagggagaagagttactc
agagctttggatcaagttaactaa
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integrated database retrieval system
