Castor canadensis (American beaver): 109683040
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Entry
109683040 CDS
T04791
Symbol
Trim28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccan01001
]
109683040 (Trim28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccan04121
]
109683040 (Trim28)
Enzymes [BR:
ccan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109683040 (Trim28)
Protein kinases [BR:
ccan01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
109683040 (Trim28)
Ubiquitin system [BR:
ccan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109683040 (Trim28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
PHD_2
PHD-1st_NSD
YaaC
DUF7615
Motif
Other DBs
NCBI-GeneID:
109683040
NCBI-ProteinID:
XP_020014257
UniProt:
A0A250YLG5
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MAASAAAASAAAAASAASGSPGPGEGSAGGEKRASASSAAASASASSPAGGGGEALELLE
HCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAATNSSGDGGAAGDGAVVDCPVCKQQ
CFSKDIVENYFMRDSGSKAASDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQR
VKYTKDHTVRSTGPAKSRDGERTVYCTVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQ
FLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIM
KELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALLL
SKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGANSTGPAAM
APPRAPGPLSKQGSGSNQPMEIQEGYGFGSDDPYSSAEPHVSGMKRARSGEGEVSGLMRK
VPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQAGTVPPGAPGA
PPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMALAEGPGAEGPRLASPSGSTSSGLE
VVAPEGSSAPAGGAGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEW
SCSLCHVLPDLKEEDGNLSLDGAENTGVVAKLSPANQRKCERVLLALFCHEPCRPLHQLA
TDSTFSLQEQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQ
SIIGLQRFFETRMNDAFGDTKFSSVLVEPPPLNLPSAGLSSQDLSGGPGDGP
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcttcagcggcggcggcggcctcggccgcctctggcagc
ccgggccccggcgagggctcggcgggcggcgagaagcgcgcctccgcctcttcagccgca
gcctccgcctcggcctcgtcgcccgcggggggcggtggcgaggcgctggagctgctagag
cactgcggcgtgtgccgggagcgtctgcggcccgaaagggagccgcggctgctgccttgc
ctgcactcagcctgtagtgcctgcctcgggcctgcggcacccgccgcgaccaacagctcg
ggtgatggcggcgcggcgggcgacggcgccgtggtggactgtccagtgtgcaagcagcag
tgcttctccaaagacatcgtggagaattactttatgcgggatagtggcagtaaggctgcc
tccgacgcccaggatgccaaccagtgctgcactagctgtgaggataatgccccagctacc
agctattgtgtggaatgctctgagccactgtgtgagacatgcgtggaggctcaccagcgc
gtgaagtacaccaaggaccacactgtgcgctccactgggccggctaaatctcgggatggt
gaacgcactgtttattgcaccgtgcacaagcatgagccactcgtgctgttctgtgagagc
tgtgataccctcacctgccgggactgccaactcaacgcccacaaggaccaccagtaccaa
ttcttggaggatgcagtaaggaaccagcgtaagctgctggcttcactggtgaagcgtctt
ggggacaaacatgctacactgcagaagagcaccaaggaggttcgcagctcgatccgccag
gtgtctgatgtacagaagcgtgtgcaggtagatgtcaagatggccatcctgcagatcatg
aaggagctcaataagaggggccgtgtgctggtcaatgacgcccagaaggtgactgaggga
cagcaggagcgcctggagcggcagcactggaccatgaccaagatccagaagcatcaggag
catatcctgcgctttgcctcttgggctctggagagtgacaacaacacagccctactgctt
tctaagaagctgatctatttccagctccatcgggccctcaaaatgattgtggatcctgtg
gagccacatggcgaaatgaagtttcagtgggacctcaacgcctggaccaagagtgccgaa
gcctttggcaagatcgtggctgagcgtcctggtgccaactccacgggccctgcagccatg
gctcctccaagagctcctgggcctctgagcaagcaaggctcaggcagcaaccagcctatg
gagatacaggaaggctatggctttggttcagatgacccttattcaagtgcagagcctcac
gtgtcaggcatgaagcgggcccgctcaggtgagggtgaagtgagtggcctcatgcgcaag
gtgccacgtgtgagccttgaacgcctagacctggaccttacagctgatagccagccacct
gtcttcaaagtctttccgggcagcaccactgaggactacaacctcattgttattgagcgt
ggagctgctgctgcagctgctggtcaggctgggactgtgcccccaggagctcctggtgcc
ccacctttgcctggaatggctattgtcaaggaggaagagacagaggctgccattggagcc
cctcctgctgccactgagggccctgagaccaagcctgtgttaatggcactggctgagggc
cctggcgctgagggtccacgcctggcctcaccaagtggcagcactagctcaggcctggag
gtggtggctcctgagggcagttcagccccagctggtggcgcaggcactctggatgacagt
gccaccatctgtcgtgtctgccagaagccaggtgacctggtcatgtgcaaccagtgcgag
ttttgcttccacctggactgccacctgcctgccctgcaggatgtgccaggggaggaatgg
agctgttcactctgccatgtgctccctgacctgaaagaggaggatggcaaccttagcctg
gatggtgcggaaaacactggtgtggtggccaagctgtcaccagccaaccagcggaaatgt
gagcgtgtcctgttggctctgttctgccatgaaccctgtcgccccctacaccagctggct
actgactccaccttctccctgcaggagcagcctgggggcaccctggacttgaccctgatc
cgtgcccgcctccaggagaagctgtcacccccttatagctccccacaggaatttgcccag
gatgtgggccgtatgttcaagcagttcaacaagttgactgaggacaaggcggatgtgcag
tccatcatcggcctgcagcgcttctttgagacacgcatgaatgatgccttcggtgacacc
aagttctcttctgtgctggtggagcccccaccattgaacctgcctagtgctggcctaagt
tcccaggatctgtctggtggtcctggtgatggcccttga
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