Castor canadensis (American beaver): 109683433
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Entry
109683433 CDS
T04791
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109683433 (Gapvd1)
Membrane trafficking [BR:
ccan04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109683433 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
109683433
NCBI-ProteinID:
XP_020014859
UniProt:
A0A8B7U5X1
LinkDB
All DBs
Position
Unknown
AA seq
1591 aa
AA seq
DB search
MRITSRVSASLNFSFARTCSGGFFTSSISAGGGGGDFGTLTSAAARAPTSGSEGQLWARG
RTTDPRGPRGAAHARWRGGSAAAGRREADWRAATAAARAAVAVCGQGDGLRCRVAGSPAG
TSVALLLRCPLMVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAK
QQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRL
IASSLVAGEKLNQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRR
LLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPS
QQEKLFGEKGSDRFKQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYK
TLSCVDRLEVGEVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQ
QLAMTGSEEGDPRTKSSLGKFDKNCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYI
TYSQLISLVNFMKSVMSGDQLREDRMALDNLLANLPQAKSGKSSSLEMTPYNTPQLSPAT
TPANKKNRLPIATRSRSRTNMLMDLHIDHEGSSQETIQEVQPEEVLVISLGTGPQLTPGM
MSENEVLNMQLSDGGQGDVPVDDNKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSL
DLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISE
TVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISE
TTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVS
GISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDEITHGAHQLTSPPSQSESLLAMFD
PLSSHEGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHILTPAEMEAFRQ
RHSYPERLVRSRSSDIVSSVRRPMSDPSWNRRPGNEERELPPAAAIGASSLVAAPHSSSS
SPSKDSSRGETEERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPD
RFSALTDEPSPRLSAQAQVAEDILDKYRNAIKRTSPSEGAMANYESTEVMGDGESAHDSP
RDETLQHISADDLPDSASQAAHPQDSAFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGL
PDHTDPEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDY
RKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIRE
FIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFK
LAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAY
KTPRDKVQCVLRMCSTIMNLLSLATEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISS
FYASCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgcgcataacgtcccgggtgagtgcgagtctcaatttttccttcgcacgcacctgctca
ggcgggtttttcacgtccagcatttccgcgggcggaggcggaggcgacttcgggaccctg
acgagcgcggccgcccgcgcgcccacctccggcagcgaagggcagctgtgggccagaggc
cggaccaccgatcccaggggcccccgcggcgccgcgcacgcgcgctggcgtggcggcagc
gccgccgcaggacgcagggaagccgactggcgagcggcgacggcagcagcaagggcggcg
gtggcagtctgcggccagggcgacgggctccggtgccgagtggctggctctccagcggga
acctcggtggccctcctcctcaggtgcccgttgatggtgaagctagatatccatacgctg
gcccatcacctcaaacaggaacggttatatgtaaactctgagaaacagcttattcagagg
ctgaatgcagacgtacttaaaacagctgaaaagctgtatcgtacagcatggattgcaaaa
caacagagaattaatttggatcggcttattataaccagtgctgaagcctcccctgctgaa
tgttgccagcatgccaagattttggaagatacacagtttgttgatggatacaagcaattg
ggatttcaggagacagcttatggagagttcttaagtcgattaagggaaaatccacgtctt
attgcctcctctttggttgctggagaaaaacttaatcaggagaacacacaaagtgttatt
tacacagtttttacctccctttatggcaactgcattatgcaagaagatgaaagctacctc
cttcaggttttgcgatacttgattgaatttgaacttaaagaaagtgacaatcccaggcga
cttttgaggagaggaacttgtgccttcagcatcttatttaaacttttttctgaaggactc
ttttctgccaaacttttcctcacagctactttacacgagccaatcatgcagctgcttgtt
gaagatgaggatcacctggaaacagatccaaacaagctaattgagagattctccccatct
caacaggaaaaactctttggagagaaaggctcagatagattcaagcaaaaagttcaagag
atggtggattccaatgaggccaaattggtggctttggtgaacaaatttattggttatctg
aaacagaacacctactgttttcctcatagtctgaggtggattgtgtcacagatgtacaaa
accctctcttgtgtagataggttagaagttggggaggtcagagcaatgtgtactgatctc
ctgttggcttgcttcatttgtcctgcagtggtcaatccagaacagtatggaataatttct
gatgcacctattaatgaggtggcacgatttaacctaatgcaggtaggccgtcttctgcag
cagttggcaatgactggctctgaagagggagatccccggacaaagagcagccttggaaaa
tttgacaagaattgtgttgctgctttccttgatgttgtgattgggggccgtgcagtggag
actcctcccatgtcctctgttaatcttctggaagggctgagcagaactgtagtttatata
acctacagtcagcttattagtttggtaaattttatgaaaagtgtgatgtctggagatcaa
ctgagagaagacagaatggctcttgacaatttattggcaaacctaccccaggctaagtcg
ggaaagagcagcagcttagaaatgactccctacaatactcctcagctgtctccagcaacc
actccagcaaataaaaagaatcgattacctatagcaactcggagcagaagccgcaccaat
atgctaatggatctacatatagaccatgaaggctcgtctcaagaaaccatccaggaggta
cagccagaagaggtgctggtcatttctttagggacaggtccccagcttactccagggatg
atgtcagaaaatgaggtcctaaacatgcagctttccgatggaggacaaggagatgtccct
gttgatgacaacaagctccacggtaaacctgataaaaccttgcgcttttccctctgcagt
gataatctggaaggcatatctgaaggtccttcaaatcgctccaattcagtgtcctctcta
gacctggaaggagagtctgtgtcagagctaggggcagggccttctggaagtaatggagtt
gaagccctgcagctgttggaacatgagcaagctacaacacaagataatcttgatgataag
ctaaggaagtttgagatacgtgacatgatgggtctaacagatgatagagacatatcagaa
acagtgagtgagacctggagtacagatgtcttgggaagtgattttgaccctaacatcgat
gaagatcgcttacaagaaattgcaggtgcagcagcagagaacatgctaggcagtttgctg
tgcctcccaggttcaggctcagtgcttcttgacccctgcactggttctaccatatcagag
acaacaagtgaagcttggagtgtagaggtattaccaagtgactcagaagccccagactta
aagcaggaagagcgtctacaagaactggagagctgttctggactgggcagtacatctgat
gatacagatgtcagggaggtcagttcccgccccagcacaccaggcctcagtgttgtgtcc
ggaataagtgcaacctctgaggatattcccaataagattgaagacctgcgatctgagtgc
agctctgattttgggggtaaagattctgtcactagtccagacatggatgaaataacccat
ggcgcccaccaactgacctctcctccttcccaatcagaatctttgcttgccatgtttgat
ccactctcttcacatgaaggggcttctgctgtggtaaggccaaaggttcactatgccagg
ccatcacatccaccaccagatcctccaatcctggaaggagcagtgggaggaaatgaagcc
aggttgcccaattttggttcccacattttaactccagctgaaatggaggcattcaggcaa
aggcattcctaccctgagagacttgttcgcagcaggagttctgatatagtatcttctgtc
cgacggcccatgagtgaccccagctggaaccgacgtccagggaatgaagagcgagaactc
cctccagccgcagccattggtgctagttctttggtggctgcacctcactcatcatcctcg
tccccgagtaaggactcctcaagaggagagactgaagaacgcaaagatagtgatgatgag
aaatcagacaggaacagaccttggtggagaaaacgttttgtttcagccatgcctaaagct
cctataccatttagaaagaaagaaaaacaagaaaaagacaaagatgatctggggcctgac
agattctcagcacttacagatgagcccagccctaggctcagtgcacaggctcaggttgct
gaggatattctggacaagtaccggaatgccattaaacgaaccagccctagtgaaggagca
atggcaaactatgaaagtacagaggtcatgggtgatggtgaaagtgcacatgattctcct
cgtgatgaaacactacaacacatctcagctgatgatcttccagactctgcaagccaggca
gcccaccctcaggattcagccttctcttatcgagatgcaaaaaagaaactgaggcttgct
ctttgctctgcggactctgttgccttcccagtgttaacacattcaacaaggaacggattg
ccagaccatacagaccctgaagacaatgaaattgtgtgcttcttaaaagttcagatagct
gaagcaattaatttacaagataagaacttaatggctcaacttcaggaaacaatgcgctgt
gtgtgccgctttgataacaggacttgtaggaaactgctggcatccattgctgaggattac
aggaaaagagctccatatatcgcttacctcactcgctgtcggcaaggactgcagaccaca
caggctcacctggaaaggctcttgcagagggttttgcgggacaaagaagtagccaataga
tattttaccactgtgtgtgtgagattactgcttgagagcaaagaaaagaagatcagggaa
ttcattcaagactttcagaaactcacagcagctgatgacaaaactgctcaggtagaagat
tttctacagttcctttatggtgcaatggctcaggatgtcatatggcaaaatgccagtgaa
gaacaacttcaggatgctcagctggccattgaacgaagtgtgatgaatcggattttcaag
cttgctttctaccctaatcaggatggggacatacttcgtgaccaggttcttcatgaacat
atccagagattgtctaaagtagtgactgcaaaccacagagctcttcagataccagaggta
tatctccgggaagcaccatggccatctgcacagtcagaaatcaggacaataagtgcttac
aaaaccccccgggacaaagtgcagtgcgtgctgagaatgtgctcaaccatcatgaacctc
ctgagcctggccaccgaggactccgtcccgggggcagatgactttgtgcctgtactggtg
ttcgtgctgataaaggcaaacccaccctgtctgctatccactgtgcagtacatcagtagc
ttctatgccagctgtctgtctggggaggaatcctactggtggatgcagtttacagcagca
gtggagttcattaaaaccatcgatgaccggaagtga
DBGET
integrated database retrieval system
