Castor canadensis (American beaver): 109683735
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Entry
109683735 CDS
T04791
Symbol
Tnrc6a
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109683735 (Tnrc6a)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109683735 (Tnrc6a)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109683735 (Tnrc6a)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109683735 (Tnrc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109683735
NCBI-ProteinID:
XP_020015329
UniProt:
A0A8B7U7F8
LinkDB
All DBs
Position
Unknown
AA seq
1959 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNQQQQQPQQQPQPQPQQQPQQQQQPQQQQ
PPQPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNNQAESSAVTNQQ
PQNNGEVQNSKNQSDLNHNTSESHYENSQLGPVSSTSDCSTNCKNAVVNDLLEKEAWPSV
PGSEPELASECVDADSASSSESERNITIMASGSTGGEKDSLRNSTGLGSQNKFVVGSSSN
NVGHGTSTGPWGFPHGTIISTCQVSVDAPESKSENSNNRVNAWGTVSSSSNGGLNPSTLN
SASNHGAWPVLENNGLALKGPIGSGSSGINIQCSSIGQMPNNQSINSNVSGSSTHGTWGS
LQETCESEVSGTQKVSFSGQPQNIATEITGPNNTTNFMTSSLPNSGSVQNNELPSSNTGA
WRVSTMNHPQIQAPSVMNGTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCSGPDGQAN
GDTVNATLMQPGVNGPMGTNFQINTNKGGGVWESGAANSQSTSWGSGNGANSGGSRRGWG
TPAQNTGTNIPSVEWNKLPSNPHSNDSTNGNGKFTNGWKSTEEEDQGSSTSQTNEQSSVW
AKTGGTVESDGSTESTGRLDEKGTGESQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGW
GQTPIKQNTAWDTEASPRGERKTDNGTEAWGSSATQTFNSGACIEKTSPDSNDTSSVSGW
GDPKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGNCKEEKSAWNDSQKNKQGWGDGQ
KSNQGWSVSASDNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNELSKTSSFTWGNNIN
PNNSSGWDESSKPNPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDVVGSWGIPPATG
KPPGTGWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWN
KNVPNGSSRSDQQAQVHQLLPSASAISNKEASSGSGWGEPWGEPSTPATTVDNGTSAWGK
PIDSGPSWGEPIAAASSTSTWSSSSVGPQALSKSGSKSMQDGWCGDDLQLPGNRPTGWEE
EEDVEIGMWNSNSSQELNSSLNWPPYTKKISSKGLSGKKRRRERGMMKGGNKQEEAWINP
FVKQFSNISFSRDSAEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRP
QISKESSMERNPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNL
NSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYA
PNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQ
GRPLSVQQQMMQQSRQLDPNLLVKQQTPPSQQQSLHQPAMKSFLDNVMPHTTTELQKGPS
PINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSG
FRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPN
IDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNV
PLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPP
LSTWDNSPLRVGGGWGSSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQ
HGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQS
QSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPH
YSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaagaaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagctacagccaacaatcagcagcagcagcagccgcagcag
cagccacagccacaaccacagcaacagccacagcagcagcagcagccgcagcagcagcag
ccaccgcaaccacaggccttgcctcggtatcctcgtgaagtacctccacgatttcgccac
caggaacataaacagcttctaaagaggggtcagcattttcctgtcatagcagcaaacctg
ggatctgctgttaaagtgttaaacaaccaggcagaaagcagtgctgtaacaaatcaacag
ccacaaaataacggagaggtgcagaacagcaaaaaccagtcagatctaaaccataatact
tcagaatcccattatgaaaattcccagctgggacctgtgtcttctacaagtgactgtagc
acaaactgtaagaatgctgttgtaaacgacttattggaaaaagaagcatggccctcagtc
cctggcagtgaaccagagttggcttcagaatgtgtggatgctgattctgcctccagttct
gaatcagagagaaacatcactatcatggcttcagggagcacaggtggtgaaaaagatagt
cttcgtaatagcactggacttggttcccaaaacaagtttgtggttggtagcagcagcaat
aacgtgggccatggaactagtactggaccatggggcttcccccatggaaccatcataagc
acatgtcaggtctctgtggatgctcctgaaagcaagtcagaaaatagcaacaatagagtg
aatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcactttgaat
tcagctagcaaccatggtgcctggccagtattagagaacaatggacttgccctaaaaggg
cctatagggagtggtagttctggcatcaatatccagtgcagttccataggccagatgcct
aacaatcagagtattaactctaatgtgagtggttcttctacccatggtacctggggaagc
cttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagtggtcaa
cctcaaaatattgccactgaaataactggaccaaataacactactaactttatgacctct
agtttaccaaactccggttcagtacagaataacgaactgcctagtagtaatacaggggcc
tggcgtgtgagcacaatgaatcatcctcagatacaggctccatcagttatgaatggcact
tccctttctcatcttagcaacggagagtcaaaaagtggaggctcttatggtactacatgg
ggtgcctatggttctaattactctggtgacaaatgttcagggcctgatggccaagctaat
ggtgacactgtgaatgcaactctaatgcagcctggtgtaaatgggcctatgggcactaac
tttcaaattaatacaaataaaggaggaggtgtatgggagtctggggcagcaaattcccag
agtacatcatggggaagtggaaatggtgcaaattctggtggaagtcgaagaggatgggga
acccctgcacaaaacactggcactaacatacccagcgtcgagtggaacaaactgcctagc
aatccacattccaatgacagtacaaatggcaatggtaagtttacaaatggatggaaatct
actgaggaagaggatcagggttctagcacatctcagacaaatgagcaaagcagtgtgtgg
gccaaaacaggaggcacagtggagagtgatggtagtacagaaagcactggacgccttgat
gaaaaaggaaccggggaaagtcagagtagagatagaagaaaaattgatcagcacacatta
ctccaaagcattgtaaacagaactgacttagatccacgtgtcctgtccaactccggttgg
gggcagactcctattaagcagaatactgcctgggatactgaagcatcgcctagaggtgaa
agaaagactgacaatgggacagaggcctggggaagctctgcaacacagacttttaactca
ggggcatgtatagagaagactagccctgatagtaatgatacctcatctgtatcagggtgg
ggcgatcccaaacctactctgaggtggggagattccaaaggctcaaactgccaggggggg
tgggaagatgattctgctgctacaggaatgatcaagagcaatcagtgggggaattgcaaa
gaagagaagtccgcatggaatgattcgcaaaagaacaaacaggggtggggtgatggacaa
aaatcaaaccaaggttggtctgtttctgccagcgataactggggagaaacttcaaggagt
aaccattggggtgaggccaataagaagtccagctcaggaggtagtgacagtgacaggtct
gtttctggttggaacgaacttagtaaaactagttcttttacttggggaaataacataaat
ccaaataattcatcaggatgggatgaatcttctaaacctaatccttcccagggatgggga
gaccctccaaagtctaatcagtctctaggttggggagattcatcaaagccagtcagttct
ccagactggaacaagcaacaagacgttgttggatcttggggaatcccaccagccacaggc
aaacctcctggtacaggctggttggggggacctataccagccccaacaaaagaagaagaa
ccaacaggctgggaggaaccatccccagagtctatccgacgcaaaatggagattgatgat
ggaacgtcagcttggggagatccaagcaaatacaactacaaaaatgtgaacatgtggaac
aaaaatgtcccaaatggcagcagccgttcagaccagcaagcacaggtacatcagctgcta
ccatctgcaagtgccatctcaaacaaagaggcaagcagtggctctggctggggtgagccc
tggggggagccttctactccagccacaactgtggataatggtacttcagcatggggtaaa
cccatagacagtggtcccagctggggggaacccattgctgcggcatccagcacatccacg
tggagctccagctctgttggtccacaggcgttaagcaaatctgggtccaaatctatgcaa
gatggctggtgtggtgatgatctgcaactgcctggaaatcgccccactggctgggaagag
gaggaggatgtagagattggaatgtggaatagtaactcatctcaagagcttaactcatct
ttaaattggccaccatataccaagaaaatatcatcgaagggtctgagtggcaaaaaaagg
agaagggaaaggggaatgatgaaaggtggaaacaaacaagaagaagcatggataaatcca
tttgttaaacagttttcaaatatcagtttttcgagagactcagcagaagaaaatgtacag
agcaataagatggacctttctggaggaatgttacaagacaaacgaatggagatagataaa
catagcctaaatattggtgattacaatcgaacggtcgggaaaggccctggttctcggcct
cagatttccaaagagtcttccatggagcgcaatccttattttgataaggatggcattgta
gcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaagcttcccccttca
aatagtgcactacctaaccaggcccttggctccatagcagggctgggtatgcaaaacttg
aattctgttagacagaatggcaatcccagtatgtttggtgttggaaacacagcagcacaa
ccccggggcatgcagcagcctccagcacaacctcttagttcatctcagcctaatctccgt
gctcaagtgcctcctccattactttcccctcaggttccagtttcattgctgaagtatgca
ccaaacaacggtggcctgaatccgctctttggccctcaacaggtagccatgctgaaccag
ctatcccaactaaaccagctttctcagatctcccagttacagcgattgttagcgcagcag
caaagggcgcagagtcagagaagcgtgccttctggtaaccggcagcagcaagaccagcag
ggtcgacctcttagtgtgcagcagcaaatgatgcaacaatctcgtcaacttgatccaaac
ctgttggtgaagcagcagaccccaccatctcagcagcagtcactccatcagccagccatg
aagtctttccttgacaatgtcatgccccacactacaacggagctgcaaaaagggccgtca
ccaattaatgctttcagcaactttcctataggcttgaactcaaacttgaatgtaaatatg
gatatgaacagtattaaagagccacagtcaaggttaaggaagtggactacagtggacagc
atttctgtgaacacatctttggatcagaactccagcaaacatggtgctatttcaagtggt
ttcaggctggaagagtctccatttgttccctatgactttatgaacagcagtacttcacca
gccagtcctccaggttcaataggagatggctggccacgtgccaaatcgcctaacggctct
agcagtgttaattggccaccagaatttcgccctggtgaaccatggaaaggttatccaaac
attgaccccgaaactgacccttacgtcactcctggcagtgtcataaacaatctttcaatt
aatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctcatccttg
aacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaacgtt
cccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaattgacatgg
tctcctggttcagttacaaacacctctctggctcatgagctgtggaaggtccctttgcca
cctaaaaacatcactgctccgtcccgcccacctccgggactgactggtcagaagccaccc
ttgtctacatgggataattctccccttcgtgtaggtggaggatggggaagttctgacgcc
agatataccccaggttccagctggggtgagagcagctcagggagaataacaaattggctt
gttctgaaaaaccttacacctcagattgatggctctactctgcgaaccctgtgcatgcag
catggcccactgataacattccacctgaacctcccacatggaaatgcgctggtccgttac
agttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgtgtattggggaac
actactattcttgctgagtttgccagtgaagaggaaatcagtcgtttctttgcacaaagt
cagtctctgaccccttctcccggctggcagtctcttgggtccagccaaagccggctgggc
tccctcgactgttcccactcattctccagccggaccgatctcaatcactggaatggtgct
gggctgtcgggaactaactgtggagaccttcacggcacttccctctgggggaccccacat
tattccacaagcctctggggtcctccgagcagcagcgacccccggggaattagcagccca
tcccccattaatgcttttctttctgttgaccacctgggtgggggtggggagtccatgtaa
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integrated database retrieval system
