Castor canadensis (American beaver): 109684234
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Entry
109684234 CDS
T04791
Name
(RefSeq) DNA excision repair protein ERCC-8-like isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03420
Nucleotide excision repair
ccan04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109684234
09124 Replication and repair
03420 Nucleotide excision repair
109684234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccan04121
]
109684234
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109684234
Ubiquitin system [BR:
ccan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109684234
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
109684234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
109684234
NCBI-ProteinID:
XP_020016100
UniProt:
A0A8B7UDU0
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MLSFLSSRQAGLEDPLRFRRAESTRRILSLELNKDRDVERIHSSGVNTLDVEPIEGRYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADVFTFEETVYSHHMSPVSTKHCLVAGSFGTKGPKVQLCDLKSGSC
SHILQGIFYFETATTLSKPFNKKKLLTVYFL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctttttgtcctctcgacaagcgggtttggaggatcctctccgctttcgcaga
gcggagtccacccggaggatattgtcattggagttaaacaaagacagagatgttgaaaga
atccatagtagtggagttaacacccttgacgttgaacctattgaagggagatacatgtta
tcaggtggttcagatggtgtgattgtactttatgaccttgagaactccagcagacaacct
tattacacatgtaaagcagtgtgctccgttggcagaaaccatcctgatgttcacaaatac
agtgtggagactgttcagtggtatcctcacgacactggcatgttcacatccagctcattt
gataaaactctgaaagtgtgggatacaaatacattacaaactgcagatgtatttactttt
gaagaaacagtttatagccatcatatgtctccagtctccaccaagcactgtttggtagca
ggttcgttcggcactaaaggacccaaagtacaactttgtgacttaaagtctggatcctgc
tctcacattttacagggtattttttactttgaaacagctactactttgagtaaaccattc
aataaaaaaaaattactaacagtgtattttttgtaa
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