Castor canadensis (American beaver): 109684383
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Entry
109684383 CDS
T04791
Symbol
Top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03440
Homologous recombination
ccan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109684383 (Top3b)
03460 Fanconi anemia pathway
109684383 (Top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccan03032
]
109684383 (Top3b)
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109684383 (Top3b)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109684383 (Top3b)
DNA replication proteins [BR:
ccan03032
]
Eukaryotic type
DNA Topoisomerases
109684383 (Top3b)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109684383 (Top3b)
FA (Fanconi anemia) pathway
109684383 (Top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
109684383
NCBI-ProteinID:
XP_020016358
UniProt:
A0A250Y5J7
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGNMSSHKGLNGACSVHEYTGTFTGQQVRFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDK
EGENICFEVLDAVLPVMNKAHSGEKTVFRARFSSITDTDICNAMARLGEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNVDKDKFLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPLA
LNTVEMLRVASSALGMGPQHAMQTAERLYTQGYISYPRTETTHYPENFDLKGSLRQQANH
PYWADTVKRLLAEGINRPRKGHDAGDHPPITPMKSATEAELGGDAWRLYEYITRHFIATV
SHDCKYLQSTISFRIGPELFTCSGKTVISPGFTEIMPWQSVPLEESLPTCQRGDTFAVGE
VKMLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECESGVLVLDPTSGPKWKVACNKCNVVAHCFENAHRVRVSADTCNTCEAALLD
VDFNKAKSPLPGNETQHTGCVFCDPVFQELVELKHAASCHPMHRGGPGRRQGRGRARGRR
PPGKPNPRRPKDKMSALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgtactcatggttgcagagaaaccatccctagctcagtccattgccaaaatc
ctctcccgaggcaacatgtcctcgcacaaagggctgaatggggcatgctcagttcatgag
tacacaggaaccttcactggccagcaggtccgattcaagatgacatctgtctgtggtcac
gtgatgactctggatttcctgggaaagtacaacaagtgggacaaggtggaccctgcagag
ctgttcagccaagctcccacagagaagaaagaagctaaccccaagctgaatatggtgaag
ttcctgcaggtggagggcagaggatgtgactacattgttctgtggctagactgtgacaag
gaaggggagaacatttgctttgaggtccttgatgctgttctgcctgtcatgaataaggcc
cacagtggtgagaagacagtgttccgggccaggttcagctctatcactgacacagacatc
tgtaatgccatggcccgcctgggtgagccagatcacaatgaagcgctctcagtggatgcc
cgccaggagctggacctgcgcattggctgtgctttcaccaggtttcagacgaagtatttc
caagggaaatatggcgatttagacagttctctcatctcctttgggccatgtcagactcct
accctgggattctgcgtggagagacatgataaaatccagtccttcaaaccagagacctac
tgggtgctacaggccaaggttaatgttgataaagacaaatttctccttttggactgggac
cgagtgagagtgtttgaccgggagatcgcacagatgtttttaaacatgacaaagctggaa
aaggaagcccaggtggaggccacaagcaggaaagaaaaggctaagcagaggccgctggcc
ttgaacactgtagagatgctgcgtgtagccagctctgctctgggtatgggaccacagcat
gccatgcaaacagccgagcggctgtacacacagggctatatcagctacccacggacagag
accacccactaccccgagaactttgacctgaagggctctcttcggcagcaggccaaccac
ccctactgggcggacacagtgaagcgattgttagcggaaggtatcaaccgccctcggaaa
ggtcatgatgctggtgaccatcctcccatcacccccatgaagtctgccacagaggccgaa
ttagggggtgatgcatggcggctatatgagtacatcaccaggcacttcattgctacagtt
agtcacgactgcaagtacctccagagcaccatctccttcaggatcgggcctgagctcttc
acctgctcagggaaaactgtcatctccccaggcttcacagagatcatgccctggcaaagt
gtgcccctggaggagagcctgcctacctgccagagaggtgacacctttgctgtgggcgag
gtgaagatgctagagaagcagacgaacccacctgactacctgactgaggctgagctcatc
acgctcatggagaagcatggtatcgggacagatgccagtatacctgtgcacatcaacaat
atctgccagcgcaattatgtcactgtggagagtggccgccggctcaagcccactaacctt
ggcatcgtcctagtgcatggctactacaagattgatgcagagctggtgctccccaccatc
cgcagtgcagtggaaaagcagctgaatctgattgcccagggtaaagccgactaccgccag
gtcctgggccacaccctggatgtcttcaagagaaagttccactactttgttgactccatc
gctggcatggacgagttgatggaggtgtctttctcacccctggcggccacaggcaagccc
ctttcacgctgtgggaagtgccaccggtttatgaagtacatccaggccaagcccagccgc
ctgcactgctctcactgtgatgagacttacaccctgccccaaaatggcaccatcaagctc
tacaaggagctacggtgcccactggacgactttgagttggtcctgtggtcctcaggttcc
cggggcaagagctacccattgtgcccctactgctacaatcacccgcccttccgagacatg
aagaaaggcatgggctgcaacgagtgcacacaccccacctgccagcactcactgagcatg
ctgggaattggccagtgcgtggaatgcgagagtggggtcctggtgctggaccccacttca
gggcccaagtggaaggtggcctgcaacaagtgcaatgtggtggcccactgcttcgagaac
gcccaccgtgtacgggtatctgctgacacttgcaacacctgcgaggctgccctactggac
gtggacttcaacaaggccaagtcccccctccctggcaacgaaacacagcacacaggctgt
gtcttctgtgaccctgtcttccaggagctagtggagctaaagcatgcagcctcctgtcac
cccatgcaccgtggtgggcctggaagaaggcagggccgagggcgggcccggggccggcgg
cccccaggtaagcccaaccccaggcggccaaaggacaaaatgtcagctctggctgcctac
tttgtttga
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