Castor canadensis (American beaver): 109684778
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Entry
109684778 CDS
T04791
Symbol
Ldb3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109684778 (Ldb3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccan04990
]
109684778 (Ldb3)
Domain-containing proteins not elsewhere classified [BR:
ccan04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109684778 (Ldb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
DUF3854
Motif
Other DBs
NCBI-GeneID:
109684778
NCBI-ProteinID:
XP_020016913
UniProt:
A0A8B7UB45
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPVAISTAAPPIQSPLPVISHQKVVVNSPANADYQE
RFNPSALKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSD
FSGASPLASLPVKDLAVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMT
GTEYMQDPDEEALRRSRPQASAYSPAAASSPAPATHTSYSESPAAPAPKPRVVTTASIRP
SVYQPVPASTYSPSSGANYSPTPYTPSPAPAYTPSPAPTYSPSPAPTYMPSPAPNYNPTP
SAAYSGGSVESASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGAPAYSPTGPQVTPLAR
GMVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ
NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
DKPLCKKHAHAINV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagtgtaaccctgactgggcctggaccctggggcttccgtctgcaggggggc
aaggacttcaacatgcccctcactatttcccggatcacaccaggcagcaaggcggcccag
tcccagctcagccagggagacctcgtggtggccatcgacggcgtcaacacagacaccatg
acccacctggaagcccagaacaagatcaagtctgccagctacaacctgagtctcactctg
cagaagtcgaagcgtcctgttgccatttccacagcagcacccccaatccagtctcctctg
ccagtaatctcccaccagaaggtggtagtcaactctccagccaacgccgactaccaggaa
cgcttcaatcccagtgctctgaaggactcagccctgtccacccacaagcccattgaggtg
aaggggctgggcggcaaggccaccatcatccatgcccagtacaacacacccatcagcatg
tactcccaggatgccatcatggacgccatcgctgggcaggcccaagcccagggcagtgac
ttcagtggggcgtcgccgctggcgagtcttcctgtgaaggatttagcagtggacagtgcc
tctccagtgtaccaggctgtgatcaagaaccagaacaagccagaagacgaggctgatgaa
tgggcccgacggtcctccaacctgcagtctcgctccttccgcatcctggcccagatgaca
gggacagaatacatgcaagaccctgatgaagaagctctgcgaaggtcaaggccccaggct
tctgcctacagccctgcagcagcctcctctccagcaccagccactcataccagctacagc
gagagtcctgctgcccctgcacccaagccccgggttgtcaccactgccagcatccggcct
tctgtctaccagccagttcctgcatctacctacagcccatcctcaggagccaattacagt
ccgactccctacaccccctcgcccgcgcctgcctacaccccctcgcccgctcccacttat
tccccctcccctgcaccaacctatatgccatcgcctgccccaaactataaccccacaccc
tcagcggcctacagcgggggctccgtggagtctgccagccgtcccccctgggtgaccgat
gacagcttctcacagaagtttgctcctggcaagagcaccacctccatcagcaagcagacc
ctgccccgaggggccccagcctacagcccaactggtccccaggtgaccccccttgccaga
ggcatggtccagagagccgagcgcttcccagccagcagccgaactccactctgcggccac
tgcaacaacgtcattcggggcccttttctggtagccatgggccgctcctggcatccagaa
gagttcaactgtgcctactgcaagacctccctggcagatgtgtgctttgtggaagagcag
aacaatgtttactgtgagcggtgttatgagcagttctttgccccactctgtgccaagtgc
aacaccaaaatcatgggggaagtgatgcatgcactgagacagacgtggcataccacctgc
tttgtctgtgcagcctgcaagaagccttttgggaacagcctcttccacatggaagatgga
gaaccctactgtgagaaagactacatcaatctgttcagcaccaaatgtcatggctgtgat
ttccctgtggaagccggtgacaagtttattgaagcactggggcatacctggcatgacacc
tgcttcatttgtgcggtctgccatgtgaatctggagggacagccgttctactccaagaag
gacaaacccctgtgcaagaagcacgctcatgccatcaacgtgtag
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