Castor canadensis (American beaver): 109684801
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Entry
109684801 CDS
T04791
Symbol
Scaf8
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109684801 (Scaf8)
03041 Spliceosome [BR:
ccan03041
]
109684801 (Scaf8)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109684801 (Scaf8)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109684801 (Scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
SKN1_KRE6_Sbg1
Motif
Other DBs
NCBI-GeneID:
109684801
NCBI-ProteinID:
XP_020016949
UniProt:
A0A8B7UCK3
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPG
TPVTPVXPANCGPSLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLITDLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFKKKLMDRFDFGDDSEHSEEP
KKEFQLSTVRLHFLITMISFSVIFPPVFLFSSHVSESVNNSIFHQIAEQLQQQNLEHLRQ
QLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDE
GHDAVEGEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRE
RKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLF
EEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTE
YKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGMIDQETVDAEWETVKSSEPIKETVQTTQS
PTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPP
FLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPPLSMTPETVKDVGFGSLVL
PGGSVASSLATSTLPAGNVFNPPTKQAEPEEKVPHLIEHQISSGENTRSVIPNDIPSNAA
ILGGQPPNVTSNSVILGVQRPNVSSNSEILGVRPVNVSSSSGIIAAQPPNILNHSGILGI
QPPSVSSSSGLLGVLPPNMPNNSGLVGVQPPNVTNASGLLGTQPPAGPQNLPPLNIPNQR
MPALPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSPLHPPPRGPFPPADIFS
HPERPFLAPGRQSVDNVTNPDKRIPLGNDNIQQEGDRDYRFPPIETREGISRPPPVDVRD
VVGRPIDPREGPGRPPLDGRDHFGRPPVDMRENLVRPGIDHHLGRRDHFGFTPEKPWGHR
GDFDEREHRVLPVYGGPKGLHEERGRFRAGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPW
ERQRDRDDRDFDFCREINGNRLGRERIQNTWVPPPHTRVFDYFEGATSQRKGDNVPQVNG
ENTERHAQPPPLPVQNDPELYEKLTSSSEISKEKTDTVADIESEPVVVESTETEGT
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaaaccttcaacagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactataaacca
cccatttctaaagcgaaaatgacccagattacaaaggcagccatcaaagctataaagttc
tataaacacgtggtacaaagtgttgaaaaatttattcagaaatgtaaaccagaatataag
gtgcctggactttatgttattgactccattgtgcgacagtctcgacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtattaaacttatggcagaag
aataatgtatttaaaagtgagattattcaacctcttttggatatggcagcggggattcct
cctccagttgtcacacctgttttagccagtactactactgctatgagcaatactccagga
acacctgtgacacctgttnatccagccaattgtggtccaagcctgcctgatccgtgggta
tcacagataacaaatacagatacacttgcagctgtcgctcagatcttacaaagtcctcaa
ggccaacaactccagcagttaataacagacttacagatacagcagcagaagcctcagcct
tccatcctgcaggccttggatgcgggtcttgtggttcagttgcaggctctcacagcacag
cttacagctgcagctgctgcagccaacacacttactcccttagaacagggggtatctttt
aaaaagaagttgatggataggtttgattttggggacgattctgagcatagtgaagaaccc
aaaaaggaattccaactctcaactgtaagattacattttcttataaccatgatttctttt
tctgttatatttccacctgttttcctttttagttctcatgtttcagaatctgtgaacaat
tccatttttcatcagatagcagaacagctacaacagcaaaaccttgagcatctcagacag
cagctcctggaacagcaacagcctcaaaaggcaacgcctcaggatagtcaagaaggaaca
tttgggtcagagcattcagcgtcaccatcacaaggaagcagccagcagcactttctcgaa
cctgaagcaaatttggatgattccatagatattcagcaacaggacatggatatagatgaa
gggcatgatgcagtggaaggggagatctttgaacaagaagctaagaaagtggctgttcgc
tcaagatcaagaactcattcccgatctcgttcaagatcaccaagaaaacgaaggtccagg
tcacgatctggttctcgaaagcgtaagcacagaaagcgatcacgttcccgctcgagagaa
aggaagaggaaatcatcacgttcatactcaagtgaaaggagagccagagaaagggaaaaa
gaacgacagaaaaagggattgccaccaattagatctaaaacattaagtgtgtgtagcact
acactctgggttggtcaggtggacaagaaggcaacacagcaagatttaaccaaccttttt
gaggagtttggacaaattgaatctattaatatgattcctcccaggggctgtgcttatgtc
tgtatggttcatcggcaagatgcatttcgggctcttcagaaactgagttcaggatcctat
aaaattggttcaaaggttattaagattgcttgggctttaaacaaaggtgtaaaaacggaa
tacaagcaattctgggacgtggatcttggagttacatatataccatgggaaaaagttaaa
gtggatgacttggatggttttgcagaaggaggcatgattgaccaggaaactgtagatgct
gaatgggaaactgtgaaaagttcagaacctatcaaagagacagtccagacaacacagagt
ccaactccagttgaaaaggagacagtggtcacaacccaggcagaggttttccctccacct
gttgccatgttgcagattccagtagcaccagcggtgcctacagttagtttagtcccgcca
gcatttcctgtgtcgatgccagttcctccccctggattcagtccaatccctccacctcct
tttctgcgagcaagttttaacccttcacagccacctcctggtttcatgccgcctccagtt
cccccacctgttgtaccaccccctgcaattccaccagtggtaccaacatctctagtgcaa
ccaccattgtccatgactccagaaactgtgaaagatgttggatttgggagccttgtttta
ccaggcggttctgttgccagcagtcttgctacttccactctaccagctggaaatgttttt
aatcctccaactaaacaagcagaacctgaagaaaaagtacctcatcttatagaacaccag
atttcttcaggtgaaaacaccagatcagtgattccaaatgatattccaagtaacgctgca
attttaggaggacagccgcctaatgttacaagcaattctgtaattctgggagtccaaaga
ccaaatgtatcaagtaattctgaaattcttggggttcggccagttaatgtttcaagtagt
tctgggattattgcagcccaaccaccaaatattctgaatcactctggaattttgggaata
caaccaccaagtgtttccagtagttctggacttttgggagtactacccccaaacatgcct
aataattctggacttgtaggagtacagccaccaaatgttacaaatgcttctggacttttg
ggaacacagccaccagctggacctcaaaacttaccccctttaaatatccctaatcaaagg
atgcctgcattgccaatgttagatattcgtccaggactgataccacaggcacctggacca
agattccctttaatacagcctggaattccaccccaacggggaatccctcccccatcggta
cttgattcacctcttcatccaccaccccgtggaccgtttcctccagcagatattttcagt
catccagaaagaccatttctagctcctggaagacaaagtgtagacaatgttaccaaccca
gacaaaaggataccacttggaaatgataacatccaacaggagggagatagagattaccgg
tttcctcctatagaaaccagggagggcattagcagacctcccccagtggatgttagggat
gtggttggacggcctatagatccaagagaaggtcctgggaggcctccactagatggtagg
gatcattttggaagacctcctgtagatatgagagagaatcttgtgaggccaggtattgat
catcatcttggtcgaagagaccacttcggctttactccagagaagccctgggggcataga
ggtgattttgatgagagagaacatcgggttctacctgtctatggtggtccaaaaggctta
catgaagaaagaggtagatttcgagctggaaactatcgatttgatcctagaagtggtccg
tggaacagaggatttggacaagaagttcacagagattttgatgaccgaagaagaccctgg
gagaggcagagggatagggacgacagagattttgatttctgcagagaaataaatggaaat
cgtcttggacgtgaaagaattcaaaacacttgggtccctcctccccatactcgggttttt
gattattttgaaggggccacttctcaaagaaaaggtgataatgtgcctcaggttaatggt
gaaaatacagagagacatgctcagccaccgcctttgccagtgcagaatgatcctgaactc
tatgaaaaactgacatcttcaagtgagataagcaaggagaagactgacacagttgctgat
atagaaagtgaaccagtggtggtagaaagcacagaaactgaggggacataa
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