Castor canadensis (American beaver): 109684842
Help
Entry
109684842 CDS
T04791
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04622
RIG-I-like receptor signaling pathway
ccan05161
Hepatitis B
ccan05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
109684842
09172 Infectious disease: viral
05161 Hepatitis B
109684842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109684842
03041 Spliceosome [BR:
ccan03041
]
109684842
03036 Chromosome and associated proteins [BR:
ccan03036
]
109684842
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109684842
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109684842
mRNA cycle factors
Common to processing body (P body) and stress granule
109684842
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109684842
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109684842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109684842
NCBI-ProteinID:
XP_020017008
UniProt:
A0A8C0XWW8
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVPVGNALGLDQQFASLDLNSSDNQTGGSTASKGRYIPPHLRNRDATKGFHDKDSSGW
SASKDKDAYSSFGSRSESRGKSSFFSDRGSGSRGRFDDRGQSDYDRLGSHADRSSFGKFE
RAGNSHWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPRIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRARKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEEPDKRSFLLDLLKATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAFEHHYKSSSHGRSKSSRFSGGFGAR
DYRQSIGTSSSNFNSSRASSSRSGGGGHSSSRGFGGGGYGGFHNNDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtgccagtgggaaatgcgctgggcctggaccagcagtttgctagcctagac
ctgaactcttcagataatcagactggaggaagtacagccagcaaagggcgctatatccct
cctcatttgaggaacagagacgccactaaggggttccacgacaaagacagttcagggtgg
agtgctagtaaagacaaggacgcttacagcagttttgggtctcggagtgagtcaagaggc
aagtctagtttcttcagtgatcgtggaagtggatcgagagggaggtttgatgatcgcgga
cagagtgactatgatcgccttggcagccatgcagatagaagtagctttggaaaatttgaa
cgtgctggaaacagtcactggtgtgacaaatcagatgaagatgactggtcaaaaccactc
ccaccaagtgaacgcttggaacaagaactcttttctggaggcaacactgggattaatttt
gagaaatatgatgacattccagttgaggcgacaggcaacaactgccctccacgtattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgttat
acccgcccaactccagtgcaaaagcatgctattcctataatcaaggagaaaagagacttg
atggcatgcgcccaaacaggatcgggaaaaaccgcagcatttctcttgcctatcttgagt
cagatttattcagatggtccaggtgaggccttgagggccaggaaggaaaatggaaggtat
gggcgccgcaaacagtacccaatctccttggtactggcaccaacgagagaactggcagtt
cagatctacgaggaagccagaaaattctcataccgatctagagttcgtccttgtgtggtt
tatggtggtgctgatattggtcagcagattcgagacttagaacgtgggtgccacttgtta
gtagccactcctggtcgtctagtggatatgatggaaagaggaaagattggattagacttc
tgcaaatacttggtgttagatgaagctgatcggatgttggatatggggtttgaacctcag
atccgtagaatagttgaacaagatactatgcctccaaaaggtgtccgccacactatgatg
tttagtgctacttttcctaaagaaatacagatgctggcccgtgatttcttggatgaatat
atttttctggccgtaggaagagttgggtctacttctgagaacatcacacagaaagtcgtt
tgggtggaagaaccagacaaacggtcatttctacttgacctcctaaaagcaacaggcaaa
gattcacttaccttagtatttgtggagaccaaaaaaggtgcagattctctggaggatttc
ttataccatgaaggatatgcttgtaccagtatccatggagaccgttctcagcgagatagg
gaagaggctcttcaccagttccgctcaggaaaaagcccaattctagtggctacggcagta
gcagcaagaggactagatatttcaaatgtgaaacatgttatcaattttgacttgcctagt
gatattgaagaatatgtacatagaattggccgtacaggacgtgtgggaaaccttggcctc
gctacctcattctttaatgagaggaacataaatattactaaggatttattggatctcctt
gttgaagcaaaacaagaagtgccatcttggttagaaaacatggcttttgaacatcactac
aagagtagcagtcacggacgttccaagagcagtagattcagtggaggctttggtgccaga
gactatcgacaaagtattggtactagcagctccaacttcaacagcagtcgtgccagcagc
agccgcagtggtggaggtggccacagcagcagccgaggatttggtggaggaggctatgga
ggctttcacaacaatgatggatatggtggaaactataactcccagggagttgactggtgg
ggtaactga
DBGET
integrated database retrieval system
