KEGG   Castor canadensis (American beaver): 109684842
Entry
109684842         CDS       T04791                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:3.6.4.13]
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04622  RIG-I-like receptor signaling pathway
ccan05161  Hepatitis B
ccan05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    109684842
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    109684842
  09172 Infectious disease: viral
   05161 Hepatitis B
    109684842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccan03019]
    109684842
   03041 Spliceosome [BR:ccan03041]
    109684842
   03036 Chromosome and associated proteins [BR:ccan03036]
    109684842
Enzymes [BR:ccan01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     109684842
Messenger RNA biogenesis [BR:ccan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     109684842
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109684842
Spliceosome [BR:ccan03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    109684842
Chromosome and associated proteins [BR:ccan03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    109684842
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-GeneID: 109684842
NCBI-ProteinID: XP_020017008
UniProt: A0A8C0XWW8
LinkDB
Position
Unknown
AA seq 662 aa
MSHVPVGNALGLDQQFASLDLNSSDNQTGGSTASKGRYIPPHLRNRDATKGFHDKDSSGW
SASKDKDAYSSFGSRSESRGKSSFFSDRGSGSRGRFDDRGQSDYDRLGSHADRSSFGKFE
RAGNSHWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPRIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRARKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEEPDKRSFLLDLLKATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAFEHHYKSSSHGRSKSSRFSGGFGAR
DYRQSIGTSSSNFNSSRASSSRSGGGGHSSSRGFGGGGYGGFHNNDGYGGNYNSQGVDWW
GN
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgagtcatgtgccagtgggaaatgcgctgggcctggaccagcagtttgctagcctagac
ctgaactcttcagataatcagactggaggaagtacagccagcaaagggcgctatatccct
cctcatttgaggaacagagacgccactaaggggttccacgacaaagacagttcagggtgg
agtgctagtaaagacaaggacgcttacagcagttttgggtctcggagtgagtcaagaggc
aagtctagtttcttcagtgatcgtggaagtggatcgagagggaggtttgatgatcgcgga
cagagtgactatgatcgccttggcagccatgcagatagaagtagctttggaaaatttgaa
cgtgctggaaacagtcactggtgtgacaaatcagatgaagatgactggtcaaaaccactc
ccaccaagtgaacgcttggaacaagaactcttttctggaggcaacactgggattaatttt
gagaaatatgatgacattccagttgaggcgacaggcaacaactgccctccacgtattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgttat
acccgcccaactccagtgcaaaagcatgctattcctataatcaaggagaaaagagacttg
atggcatgcgcccaaacaggatcgggaaaaaccgcagcatttctcttgcctatcttgagt
cagatttattcagatggtccaggtgaggccttgagggccaggaaggaaaatggaaggtat
gggcgccgcaaacagtacccaatctccttggtactggcaccaacgagagaactggcagtt
cagatctacgaggaagccagaaaattctcataccgatctagagttcgtccttgtgtggtt
tatggtggtgctgatattggtcagcagattcgagacttagaacgtgggtgccacttgtta
gtagccactcctggtcgtctagtggatatgatggaaagaggaaagattggattagacttc
tgcaaatacttggtgttagatgaagctgatcggatgttggatatggggtttgaacctcag
atccgtagaatagttgaacaagatactatgcctccaaaaggtgtccgccacactatgatg
tttagtgctacttttcctaaagaaatacagatgctggcccgtgatttcttggatgaatat
atttttctggccgtaggaagagttgggtctacttctgagaacatcacacagaaagtcgtt
tgggtggaagaaccagacaaacggtcatttctacttgacctcctaaaagcaacaggcaaa
gattcacttaccttagtatttgtggagaccaaaaaaggtgcagattctctggaggatttc
ttataccatgaaggatatgcttgtaccagtatccatggagaccgttctcagcgagatagg
gaagaggctcttcaccagttccgctcaggaaaaagcccaattctagtggctacggcagta
gcagcaagaggactagatatttcaaatgtgaaacatgttatcaattttgacttgcctagt
gatattgaagaatatgtacatagaattggccgtacaggacgtgtgggaaaccttggcctc
gctacctcattctttaatgagaggaacataaatattactaaggatttattggatctcctt
gttgaagcaaaacaagaagtgccatcttggttagaaaacatggcttttgaacatcactac
aagagtagcagtcacggacgttccaagagcagtagattcagtggaggctttggtgccaga
gactatcgacaaagtattggtactagcagctccaacttcaacagcagtcgtgccagcagc
agccgcagtggtggaggtggccacagcagcagccgaggatttggtggaggaggctatgga
ggctttcacaacaatgatggatatggtggaaactataactcccagggagttgactggtgg
ggtaactga

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