KEGG   Castor canadensis (American beaver): 109684845
Entry
109684845         CDS       T04791                                 
Symbol
Pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03013  Nucleocytoplasmic transport
ccan03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109684845 (Pnn)
   03015 mRNA surveillance pathway
    109684845 (Pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccan03019]
    109684845 (Pnn)
   03041 Spliceosome [BR:ccan03041]
    109684845 (Pnn)
Messenger RNA biogenesis [BR:ccan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109684845 (Pnn)
Spliceosome [BR:ccan03041]
 Complex C
  Other components
   EJC/TREX
    109684845 (Pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 109684845
NCBI-ProteinID: XP_020017009
UniProt: A0A250YL14
LinkDB
Position
Unknown
AA seq 721 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVNRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGTVHSDAEKEQEEEEQKQ
EMEVKMEEEAEARESEKQQDSQPEEVMDVLEMVENVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFEVEPDKECKSLSPGKENVSTIEVEKESEEKESEPQPEPVAQPQPLPPPQ
SQSQPLSQPLSQPQPVVQPQPFSQPETLPLAVLQPPLQVIQEQGNVIPERKEFPIESVKL
TEVSVVEPVLAVHSESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSS
SSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSMDRKRRD
TSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR
R
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggcggtcgccgtaagaactttgcaggaacagctagaaaaagccaaagagagcctaaaa
aacgtagatgagaatattcgcaagctcaccggacgagacccgaatgacgtgagacccatc
caagccagactgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcaataggctgggcggggagcgtcggacaagaagagaatcacgccaagaaagt
gacccagaggatgatgatgttaaaaagccagcactgcagtcttcagttgtagctacctcc
aaagaacgtacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcactcttcaaaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaggttgaaaatgagaggagagaactctttgaagagagacgt
gctaaacagacagaattgcggcttttggaacaaaaggttgagcttgcacagctgcaagaa
gaatggaatgaacacaatgccaaaataattaaatatataagaactaagacaaagccccat
ttgttctacattcctggaagaatgtgtcctgctactcaaaaactaatagaagagtcacag
agaaaaatgaatgctttatttgaaggcagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaagtaggtacagttcatagtgatgcagagaaagaacaggaagaggaagaacaaaaacag
gaaatggaggttaagatggaagaggaagctgaggcaagggaaagtgagaagcaacaggat
agtcagcctgaagaagttatggatgtgctagagatggttgagaatgtcaaaaatgtaatt
gctgagcaggaagtaatggaaactaatcaggttgagagtatagagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgaggttgagccagataaagaatgtaaa
tccctttctcctggaaaagagaatgttagtactatagaagtggaaaaggaatctgaagaa
aaagaatctgagccccagcctgagcctgtggctcagcctcagcccctgcctccaccccag
tctcagtcccagcccctatctcagcccctgtctcagccccaaccagtagtccagccccag
cctttctctcagcctgagactttgccattagctgttttacagccaccacttcaggttatt
caggagcaaggaaatgtaatacctgagcggaaggagtttcctatagagtctgtaaaactc
actgaggtgtcagtagtagagccagttttggcagtacattcagaaagcaaaagcaaaacc
aaaactaggagcagaagtagaggtcgagctagaaataaaacaagcaagagtagaagtcga
agcagtagcagtagtagttctagtagcagttcaaccagtagcagcagtggaagcagttcc
agcagtggcagcagcagtagtcgaagcagttccagtagtagctccagtacaagtggtagc
agcagcagagacagtagtagcagcactagtagtagtagtgagagcagaagtcggagtagg
ggccggggacataatagagatagaaagcacagaaggagcatggatcggaagcgaagggat
acttcaggactagaaagaagtcacaaatcttcgaaaggtggtagtagtagagatacaaaa
ggatcaaaggataagaactcccggtctgacagaaagaggtctatatcagagagtagtcga
tcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaagg
cgttaa

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