Castor canadensis (American beaver): 109684845
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Entry
109684845 CDS
T04791
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109684845 (Pnn)
03015 mRNA surveillance pathway
109684845 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109684845 (Pnn)
03041 Spliceosome [BR:
ccan03041
]
109684845 (Pnn)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109684845 (Pnn)
Spliceosome [BR:
ccan03041
]
Complex C
Other components
EJC/TREX
109684845 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
109684845
NCBI-ProteinID:
XP_020017009
UniProt:
A0A250YL14
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVNRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGTVHSDAEKEQEEEEQKQ
EMEVKMEEEAEARESEKQQDSQPEEVMDVLEMVENVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFEVEPDKECKSLSPGKENVSTIEVEKESEEKESEPQPEPVAQPQPLPPPQ
SQSQPLSQPLSQPQPVVQPQPFSQPETLPLAVLQPPLQVIQEQGNVIPERKEFPIESVKL
TEVSVVEPVLAVHSESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSS
SSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSMDRKRRD
TSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccgtaagaactttgcaggaacagctagaaaaagccaaagagagcctaaaa
aacgtagatgagaatattcgcaagctcaccggacgagacccgaatgacgtgagacccatc
caagccagactgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcaataggctgggcggggagcgtcggacaagaagagaatcacgccaagaaagt
gacccagaggatgatgatgttaaaaagccagcactgcagtcttcagttgtagctacctcc
aaagaacgtacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcactcttcaaaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaggttgaaaatgagaggagagaactctttgaagagagacgt
gctaaacagacagaattgcggcttttggaacaaaaggttgagcttgcacagctgcaagaa
gaatggaatgaacacaatgccaaaataattaaatatataagaactaagacaaagccccat
ttgttctacattcctggaagaatgtgtcctgctactcaaaaactaatagaagagtcacag
agaaaaatgaatgctttatttgaaggcagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaagtaggtacagttcatagtgatgcagagaaagaacaggaagaggaagaacaaaaacag
gaaatggaggttaagatggaagaggaagctgaggcaagggaaagtgagaagcaacaggat
agtcagcctgaagaagttatggatgtgctagagatggttgagaatgtcaaaaatgtaatt
gctgagcaggaagtaatggaaactaatcaggttgagagtatagagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgaggttgagccagataaagaatgtaaa
tccctttctcctggaaaagagaatgttagtactatagaagtggaaaaggaatctgaagaa
aaagaatctgagccccagcctgagcctgtggctcagcctcagcccctgcctccaccccag
tctcagtcccagcccctatctcagcccctgtctcagccccaaccagtagtccagccccag
cctttctctcagcctgagactttgccattagctgttttacagccaccacttcaggttatt
caggagcaaggaaatgtaatacctgagcggaaggagtttcctatagagtctgtaaaactc
actgaggtgtcagtagtagagccagttttggcagtacattcagaaagcaaaagcaaaacc
aaaactaggagcagaagtagaggtcgagctagaaataaaacaagcaagagtagaagtcga
agcagtagcagtagtagttctagtagcagttcaaccagtagcagcagtggaagcagttcc
agcagtggcagcagcagtagtcgaagcagttccagtagtagctccagtacaagtggtagc
agcagcagagacagtagtagcagcactagtagtagtagtgagagcagaagtcggagtagg
ggccggggacataatagagatagaaagcacagaaggagcatggatcggaagcgaagggat
acttcaggactagaaagaagtcacaaatcttcgaaaggtggtagtagtagagatacaaaa
ggatcaaaggataagaactcccggtctgacagaaagaggtctatatcagagagtagtcga
tcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaagg
cgttaa
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