Castor canadensis (American beaver): 109684984
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Entry
109684984 CDS
T04791
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109684984
03015 mRNA surveillance pathway
109684984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109684984
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109684984
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109684984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
WHD_Fungal_DR
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109684984
NCBI-ProteinID:
XP_020017215
UniProt:
A0A8B7UGS1
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMNNLQIKEEKVKPDTNGVIRTSTTAEKTDEEEKEDKAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKV
IEQMGRFHPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE
ETLDTIKQYYVLCSNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMIDSKHSMDILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggccttggcggtggacgagcaggaagcggctgtcaaatcgatg
aacaatttgcagatcaaggaagagaaagtcaaaccagacaccaatggtgttatcagaacc
agtactactgcagagaagacagatgaagaagagaaagaggacaaagctgcccagtcttta
cttaacaagctgatcagaagcaaccttgtggataacacaaaccaagtggaagtcctacag
cgggacccgaactccccactctactcagtgaagtccttcgaagagcttcgcctgaagcca
cagcttctccagggagtctatgccatgggcttcaatcgaccgtctaagattcaagagaat
gcgttacccatgatgcttgccgaacccccacagaacctaattgcgcagtctcagtctggc
actgggaaaacagctgccttcgtcctggccatgctcagtagagtagaaccagcagacaga
taccctcagtgtctgtgcctctccccaacatatgagctggcgcttcaaacaggaaaagtg
attgagcagatgggcagatttcatccagaactaaagctcgcttatgctgttcgaggcaat
aaattggaaagaggtcagaagatcagtgagcagattgtcatcggcactcctggcactgtc
ctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgttctg
gatgaggcggacgtgatgatagctactcagggccaccaagatcagagcatccgcatccag
aggatgctgcccaggaactgccagatgctgcttttctccgccacctttgaagactccgtg
tggaagtttgcgcagaaagtggtcccagaccccaatgttatcaaactgaagcgtgaggag
gagacgttggacaccatcaagcaatattacgtcctgtgcagtaacagagacgagaagttc
caggccttgtgcaacctgtatggggccatcaccatcgctcaagctatgatcttctgccat
acccgcaaaacagctagttggctggcagcagagctctcaaaagaaggccaccaagtggct
ctgctgagtggtgaaatgatggtggagcagagggctgctgtgatcgagcgcttccgagag
ggcaaagagaaggttcttgtgaccaccaacgtgtgtgcccgcggtatcgatgtcgaacaa
gtgtctgtcgtcatcaacttcgatcttcctgtggacaaggacgggaacccagacaatgag
acctacctccaccggatcgggcgcaccggccgctttggcaagaggggcctggctgtgaac
atgattgacagcaagcacagcatggacatcctgaacagaatccaggagcattttaataag
aagatagaaagactggacacagatgatttggatgagattgagaaaatagccaactga
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