Castor canadensis (American beaver): 109684989
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Entry
109684989 CDS
T04791
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109684989 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109684989 (Sf3b3)
03041 Spliceosome [BR:
ccan03041
]
109684989 (Sf3b3)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109684989 (Sf3b3)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109684989 (Sf3b3)
Spliceosome [BR:
ccan03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109684989 (Sf3b3)
Complex B
109684989 (Sf3b3)
Complex C
U2 SnRNP specific factors
109684989 (Sf3b3)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109684989 (Sf3b3)
TFTC complex
109684989 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
109684989
NCBI-ProteinID:
XP_020017228
UniProt:
A0A250Y758
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagagagccactggcatcagctttgccattcatggc
aacttctctggaaccaaacaacaggaaattgttgtttcccgtgggaagatcttggaactt
cttcgaccagaccccaacactggcaaagtacatacccttctcactgtggaagtatttggt
gttatacgatcactcatggcctttagactgacaggtggcaccaaggactacattgtagta
ggcagtgactcaggtcggattgttatcttggaatatcagccatctaaaaatatgtttgag
aaaattcatcaagaaacttttggcaagagtggatgccgccgtattgttcctggccaattc
ttagctgtggatcccaaagggcgagctgttatgatcagtgctattgagaaacagaaattg
gtgtatatcttgaacagagatgctgcagcccgacttacgatttcatctcccctggaggcc
cacaaagcaaacactttagtatatcatgtggttggagtagatgtgggatttgagaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcagctaacacccagcagacgcttactttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacacggcaactttcttattacagttccagga
gggtcagatggtccaagtggagtgctgatctgctctgaaaattatatcacctacaagaac
tttggtgatcaaccagatatccgatgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaagtctatgttcttc
tttttggcccaaactgagcagggagatatcttcaagatcactttagagacagatgaagat
atggtaactgagatccggctgaaatattttgatactgttcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcttcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgaattttcatctgccatgcctctggaa
gaaggagacacattcttctttcaaccaagacctctcaaaaacctcgtattagttgatgaa
ttagacagcctgtctcctattttgttttgccagatagctgatttggccaatgaggacact
ccacagctgtatgtggcctgtggtaggggacctcggtcatctctgagagttttaagacat
ggacttgaggtgtcggaaatggcagtttctgagctgcctggtaaccccaatgctgtttgg
acagtacgtcggcacattgaagatgaatttgatgcatacattattgtgtctttcgtgaat
gccacccttgtgctttctattggagagactgtggaagaagtgactgattctgggttcctg
ggcaccacaccaaccttgtcctgctccttgttaggagatgatgccttggtgcaggtatat
ccagatggcattcggcacatacgagcagacaagagagtcaatgagtggaagacccctgga
aagaaaacaattgtgaaatgtgcagtgaaccagcgacaagtggtgatcgccctgacagga
ggagagctggtctattttgagatggatccttcaggacaattgaatgagtacacagagcgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaatgtgccacctggagagcag
cggtctcgcttcctggctgtgggactggtggacaacactgtcagaatcatttcactggac
ccctcagattgtctgcagcctctgagcatgcaggctctcccagcacaacctgagtcccta
tgtattgtggaaatgggtgggactgagaagcaggacgagctgggtgagagaggttctatt
ggcttcctgtacctgaacattgggctgcagaatggtgtgctgctgagaactgtcctcgac
cctgtcactggggacttatctgatacccgcactaggtacctggggtcccgtcctgtgaag
cttttccgagtccggatgcaaggccaggaggcagtattggccatgtcaagccgctcatgg
ttgagctattcttaccagtcccgcttccatctcactcccctgtcttatgagaccctggag
tttgcatctgggtttgcctctgaacaatgtcctgagggcattgtggctatctctaccaac
accctgaggattttggcattagagaagctaggtgctgtcttcaatcaagtagcctttcca
ttgcaatatacacccaggaaatttgtcatccaccctgagagtaacaaccttatcatcatt
gagacggaccacaatgcctatactgaggccacaaaagctcaaagaaagcaacagatggca
gaggaaatggtggaagcagcaggggaggatgaacgggagctggctgcagagatggcagca
gcattcctcaatgaaaacctccctgaatccatttttggagctcccaaggctggcaatggg
cagtgggcctctgtgatccgggtgatgaatcctattcaggggaatacattggaccttgtc
cagttggaacaaaacgaggcagcttttagtgtggctgtgtgcaggttctccaacactggt
gaagactggtatgtgcttgtgggtgtggccaaggacctgatactgaatccccgatctgtg
gcagggggctttgtctatacatacaagcttgtgaacaatggggaaaaactggagtttttg
cacaagacgccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagcttttgcgagtctatgacctgggaaaaaagaagttacttcgaaag
tgtgagaataagcatattgccaattacatatctggaatccagacaattgggcacagggta
attgtatctgacgttcaagaaagtttcatctgggttcgctataagcgtaatgagaaccag
ctcattatctttgctgatgacacctacccccgatgggtgactacagctagcctcctcgac
tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccccct
aacaccaatgacgaagtggatgaagatcccacaggaaacaaagccctgtgggatcggggc
ttgctcaacggggcctcgcagaaggcggaggtgatcatgaattaccacgttggggagaca
gtgctgtcattacagaagaccacactgatccctggaggctcagaatcacttgtctatacc
accttgtcaggaggaattggcatccttgtcccattcacatcccatgaggaccatgacttt
ttccaacatgtggaaatgcaccttcggtctgagcatccccctctctgtgggcgggaccac
ctcagctttcgttcctattactttcctgttaagaatgtgattgatggagacctctgtgag
cagttcaactccatggagcccaacaagcaaaagaatgtgtctgaagaactggatcgaacc
ccacctgaggtgtccaagaagcttgaggatatccgaacccgttatgctttctga
DBGET
integrated database retrieval system
