Castor canadensis (American beaver): 109685088
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Entry
109685088 CDS
T04791
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109685088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109685088
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109685088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
109685088
NCBI-ProteinID:
XP_020017369
UniProt:
A0A8B7UDW6
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MQHCDKCHKAFGETLNTGRQEEASKAEGNNGVAKAAGAALEGWGRGARADARGPRESHAE
ETPRRLGAAARAQEDQSRSLHLCRLRRRLPCIGVSRFLRSLIGGFAPLSRPGTARLGKGL
EGAVDRRLNFVRGAAMSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDE
NEVERPEEENASANPPSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKT
GAPQYGSYGTAPVNLNIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPW
RKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITVQQGRTGNSEKET
TLPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYGRAESPDLR
RLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFFPPGAPPTH
LPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGN
VAFPHLTGSAPSWPSLVDTTKQWDYYARREKDRDRERDRDRERDRDRDRERERTRERERE
RDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNS
RRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattgtgacaaatgccacaaagcctttggggagaccttaaatacaggtcgccag
gaggaagcatcaaaggcagaagggaacaatggcgtggcaaaggcagcaggggcagcgtta
gaaggatgggggaggggagcccgagccgacgcaagaggcccccgagaaagccacgccgaa
gagacgccgcgccgcttgggtgctgctgcgcgtgcgcaggaggaccagtctcggagtctt
catctttgccgcctccgccgccgccttccctgcattggagtctcgcgctttcttcgttcg
ctcatcggcgggttcgcgcccctctcgcgccccgggacagcgaggctggggaaggggttg
gaaggggctgttgatcgtcgccttaactttgtgcgtggggcggccatgtcggccggcgag
gtcgagcgactagtgtcggagctgagcggcgggaccggaggggatgaggaggaagagtgg
ctgtatggcggcccatgggacgtgcatgtgcacagtgatttggcaaaggacctagatgaa
aatgaagttgaaaggccagaagaagaaaatgccagcgctaatcctccatctggaattgaa
gatgaaactgctgaaaatggcgtaccaaaaccgaaagtgacggagacggaagatgatagc
gatagtgacagtgatgatgatgaggatgatgtccatgtcactataggagacattaaaaca
ggagcaccacagtatgggagttacggaacagcaccagtaaatcttaacatcaagacaggg
ggaagagtttatggaaccacaggaacgaaagtcaaaggggtagaccttgatgcacctgga
agcattaatggagttccacttttggaggtagatttggattcttttgaagataaaccatgg
cgtaaacctggtgctgatctttctgattattttaattatgggtttaatgaagatacctgg
aaagcttactgtgaaaagcaaaagaggatacgaatgggacttgaagttataccagttact
tccactacaaataaaattacggtacagcagggaagaactggaaattcagagaaagaaaca
acacttccatctacaaaagctgagtttacttctcctccatctttgttcaagactggactc
ccaccaagcagaaacagcacctcttcccagtctcagacaagtactgcttccagaaaagcc
aattcaagcgttgggaagtggcaggatcgatacgggagggctgagtcacctgatctgagg
agattacctggagcaatcgatgttattggtcaaactataactattagccgagtagaagga
aggcgacgagcaaatgagaacagcaatatacaggtcctctctgaaaggtctgctactgaa
gtagacaacaattttagcaaaccacctccatttttccctccaggagctcctcctacccac
cttccaccacctcccttccttcctcctcctccaactgtcagcactgctccgcctctgatc
ccaccaccaggttttcctcctccaccaggcgctccacctccatctcttataccaacaata
gaaagtgggcattcctctggttatgatagtcgttctgcacgtgcatttccatatggcaac
gttgcctttccccatcttactggttctgctccttcatggcctagtcttgtggacaccacc
aagcaatgggactattatgcaagaagagagaaagaccgagatagagaaagagacagagac
agagagcgagatcgggatcgggacagagaaagagaacgcaccagagagagagagagggag
cgtgatcacagtcccacaccaagtgttttcaacagtgatgaagagcgatacagatacagg
gaatatgccgaaagaggctatgagcgtcacagagcaagtcgagagaaagaagaacgacac
agagaaagacgacacagagagaaagaggagaccagacacaagtcatctcgcagtaatagt
agacgtcgccatgaaagtgaagaaggagacagtcacaggagacacaagcacaaaaaatct
aaaagaagcaaagaaggaaaagaagctggcagtgagccggctcctgaacaggagagcacc
gaagctgctcctgcagaatag
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