Castor canadensis (American beaver): 109685140
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Entry
109685140 CDS
T04791
Symbol
Tpr
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan05014
Amyotrophic lateral sclerosis
ccan05200
Pathways in cancer
ccan05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109685140 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109685140 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
109685140 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109685140 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109685140 (Tpr)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109685140 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Crescentin
DUF5082
Uso1_p115_C
DUF1192
Imm70
Motif
Other DBs
NCBI-GeneID:
109685140
NCBI-ProteinID:
XP_020017445
UniProt:
A0A8B7UHD3
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MAAVLQQVLERTELNKLPKLVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKR
LSHSQERLVNETRECQNLRLELEKLNSQLKALTEKNKELEIAQDRNVAIQSQFTRTKEEL
EAEKRDLVRTNERLSQELEYLTEDVKRLNEKLKESTATKGELQLKLDELQASDVSVKYRE
KRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQM
NGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
SELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLEKIGKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLFALRELGETREREEQETTSSKISELQLKLESSLAELEQLRESRQHQ
MQLVDSIVRQRDMYRILLSQTTGVDIPLQASSLDDISLVSTPKRSSTSQTVSTPATVPVI
ESTEAVEAKAALKQLQEIFENYKKEKADREKIQNEQLEKLQEQVTDLRSQNTKISTQLDF
ASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVR
AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQ
IEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEMNLHLNTKELLKNAQKE
VATLKQHLSNMETQLASQSAQRTGKGQPTDKEDVDDLLSQLRQAEEQVNDLKERLKTTTS
NVEQYRAMVTSLEESLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQD
DKRKAIESMEQQLSELKKTLSCVQSEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQN
KYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEERERMLKD
EVSKCVSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPFNVSLSEEGKSQEQILEIL
RFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHE
ELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGM
LQAEKKLLEEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKA
EIARSNASLTNNQNLIQSLKEDLNKIKTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRR
YKTQYEELKAQQDKVMETSAQSSGDHQEQHISVQEMQELKDILNQAETKSKSLESQVDNL
QKTLCEKETEAKNLQEQTMQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAA
KSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREH
QERHLEQRDEPQEPTSKVPEQQRQITLKSTPASGERGIASTTDPPTANIKPTPVVSTPSK
VTAAAMAGNKSTPRASIRPMVTPATVTNPSTTPTATVMPTTQVESQEAMQSEGPVEHVPV
FGSTSGSVRSTSPNVQPSISQPILTVQQQXQATAFVQPTQQSHPQIEPANQELSSNIVEV
VQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQVSDDTVEMPLSKKLK
TVTPVGTEEEAMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDL
GPLQSDQHITLSQDGQGKGDDVIVIDSDDEEDDDDENDGEHEDYEEDEEDDDDDEDDTGM
GDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEGN
TGAAESSFSQETAREQQPSSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRI
QMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVVGV
PRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAP
VTVFTESTTNDASEHASQSVPMVTTSTSTLSTTNETATGDDGDEVFVEAESEGISSEAGL
EIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQF
NRQRGISHAMGGRGGINRGNIN
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgttgcagcaggtcctggaacgaacagagctgaacaagctgcctaaattg
gtccagaacaaacttgaaaagttccttgctgatcagcaatcggagatcgatggcctcaaa
ggacggcatgagaagttcaaggtggagagcgaacaacagtactttgagatagagaagagg
ttatcccacagtcaggagagacttgtgaatgaaacccgggagtgccaaaacttgaggctt
gagcttgagaaactcaacagtcaactgaaggcactaactgagaaaaacaaagaacttgaa
attgctcaggatcgcaacgttgccattcagagccagtttacaagaacaaaggaagaatta
gaagctgaaaaaagagacttagttagaaccaatgagagactgtctcaagaactggaatat
ttaacagaggatgttaaacgtctaaatgaaaaacttaaagaaagcaccgcaacaaagggt
gaacttcagttaaagctggatgaacttcaagcttctgatgtttctgtaaagtatcgagaa
aaacgcttggagcaagaaaaggaattgctacataatcagaatacatggctgaatacagag
ttgaaaaccaaaacggatgaacttctagctcttggaagagaaaaaggaaatgagattcta
gagcttaagtgtaatcttgaaaacaaaaaagaagaggtttctagactggaagaacagatg
aatggcttaaaaacatcaaatgagcatcttcaaaagcatgtagaggatcttttgaccaaa
ctaaaagaggccaaagaacagcaggccagtatggaagaaaaattccacaatgaattaaat
gctcacataaaactctctaatctatacaagagtgctgctgatgactcagaggcaaagagc
agtgaactaacccgggcagtggatgaactacacaaacttctgaaagaagctggagaagcc
aacaaagcaatacaagatcatcttttggaggtggaggaatctaaagatcaaatggaaaaa
gaaatgcttgagaaaatagggaaattggaaaaggaattagagaatgcaaatgacctgctt
tctgcaacaaagcgtaaaggggctatattgtctgaggaggagcttgcagccatgtctccc
actgcggcagccgtagctaagatagtgaaacctggcatgaaattaactgagctgtataat
gcttatgtggaaactcaggatcagttgctcttggagaaactagagaacaaaagaattaat
aagtatctagatgaaatagtgaaagaagttgaagcaaaagcaccgattttgaaacgccag
cgtgaagaatatgaacgtgcacagaaggctgtggcaagtttatctgttaagcttgaacaa
gccatgaaggagattcagcgattgcaggaggacactgataaagccaacaaacattcatcc
gtacttgaaagagacaatcagagaatggaaatacaaattaaagatctttcacaacagatt
agagtgcttttgatggaacttgaagaagccaggggtaaccatgtaattcgtgatgaggaa
gtaagctctgctgacataagcagttcatctgaagtaatatcacagcatctagtatcttac
agaaatattgaagagcttcaacaacaaaatcagcgtctcttgtttgctcttagagaactg
ggagaaaccagagaacgagaagagcaagaaacaacttcatctaaaatctcagaacttcag
cttaaacttgaaagctcccttgctgagctggaacaactccgtgagtcacgacaacatcaa
atgcaacttgttgattccatcgttcgtcagcgtgatatgtaccgtattttattgtcacaa
acaacaggggttgatataccactacaggcttcaagcttggatgatatttctcttgtgtca
actccaaaacgttcaagtacatcacagactgtttccactcctgctacagtgcctgttatt
gaatcaacagaggctgtagaagctaaagctgcccttaaacagttacaggaaatttttgag
aactacaaaaaagaaaaggcagaccgtgaaaaaatacagaatgagcagcttgagaagctt
caggagcaagtcacagatttgcggtcacaaaacacaaaaatttctacccagctagatttt
gcttctaaacgttatgaaatgctgcaagataatgttgaaggatatcgtcgagaaataaca
tccctacaagagagaaatcagaaactcactgcaacaactcaaaagcaggaacagatcatc
aatacaatgactcaagacctgagaggagcaaatgaaaagctagctgttgcagaagtaaga
gcagaaaatttgaagaaggaaaaagaaatgcttaaattgtcagaagttcgtctttctcag
caaagggaatctttgttagctgaacaaaggggacaaaacttgctgctgactaatctgcaa
acgattcagggaatactagagagatctgaaacagaaactaaacaaaggctcagtagccag
atagaaaaactggaacatgagatatctcatctaaagaagaagttggagaatgaagtggaa
caaaggcatacactgactagaaatttagatgttcaacttttagatacaaagagacagcta
gatacagaaatgaatcttcatcttaacacaaaagaactattaaaaaatgctcaaaaggaa
gttgctacattgaaacaacacctcagtaatatggaaacccaacttgcttctcagtctgca
caaagaactggtaaaggtcagcctactgacaaagaagatgtggatgatcttctgagtcag
ctaaggcaggctgaagagcaggtaaatgacttgaaggagagactcaaaacaactactagt
aatgtggaacagtatcgagcaatggttactagcttagaggaatccttgaacaaagaaaaa
caggttacagaggaagtacataagaatattgaagttcgtttaaaagaatcagctgaattt
cagacacagttggaaaagaagttgatggaggttgagaaggaaaaacaagaacttcaggat
gacaagagaaaagccatagagagcatggaacagcagttatctgagttgaagaaaacactt
tcttgtgttcaaagtgaagtacaagaagctcttcagagagcaagtacagctttaagtaat
gaacagcaagctagacgtgactgtcaggagcaagctaaaatagccgtggaagctcagaat
aagtatgagagagaactgatgctacacgctgctgatgttgaagcactgcaagctgccaag
gaacaggtttcaaaaatggcatcagttcgccagcatttggaagaaacaacgcagaaggca
gaatcacagttgttggagtgtaaagcatcttgggaagagagagagagaatgttaaaggat
gaagtttccaaatgtgtgtctcgctgtgaagatttagagaaacaaaacagactacttcat
gatcagattgaaaaattaagtgacaaggtagttgcctctgtgaaggaaggtgtgcaaggt
ccatttaacgtgtctcttagtgaagaaggaaaatctcaagaacaaattttagaaattctc
agatttatacgacgagaaaaagaaattgctgaaactaggtttgaagtggctcaggttgag
agtctgcgttaccgacaaagggttgagcttttagaaagagagcttcaggaactgcaggac
agcctaaatgctgagagggagaaggtccaggtaactgcaaaaacaatggctcagcatgaa
gaactgatgaagaaaactgaaacaatgaacgtagttatggagaccaataagatgctaaga
gaggaaaaagagaggctcgaacaggatctacaacagatgcaagcaaaggtgaggaaactg
gagttagatattttacccttacaagaagcaaatgctgaactgagtgagaaaagtggtatg
ttgcaggcagagaagaagttattagaagaggatgtcaaacgttggaaagcacgtaatcag
catctagtaaatcaacaaaaagatccagatacagaagaatatcggaagctcctttctgaa
aaagaagttcatactaagcgtattcaacagctgactgaagaaattggaagacttaaagct
gaaattgcaagatcaaatgcatctttgacaaataaccagaatttaatacagagtctgaag
gaagatttaaataaaataaagactgaaaaggaaaccattcagaaggacttagatgccaaa
ataattgatatccaagaaaaagtcaaaactattactcaagtcaagaaaattggacgcagg
tacaagactcaatatgaagaacttaaagcacaacaggataaggtaatggagacttcggct
cagtcttctggagaccatcaggaacagcatatctcagtacaggaaatgcaggagctcaaa
gatatcctcaaccaagctgaaacaaagtcaaaatcactcgaaagtcaagtagacaatctg
cagaagacattgtgtgaaaaagagacagaagcaaagaatctccaggaacagactatgcag
cttcaatctgaactttcacgacttcgtcaggatcttcaagatagaaccacacaggaggag
caactccgacagcagataactgaaaaggaagaaaaaacaagaaaggctattgtagcagca
aaatcaaaaatagcacatttagctggtgtaaaagatcagctaacaaaagaaaacgaggag
cttaaacaaaggaatggagcgttagatcagcagaaagatgagctcgatgttcgtatgact
gctctcaagtcccaatatgaaggtcgaattagtcgtttggaaagagaactcagggaacat
caagagagacacctggagcaaagagatgaacctcaagaacctactagtaaggtcccagaa
cagcagagacagatcacattgaagagtactccagcttctggtgaaagaggaattgccagc
acaacagatccaccaacagccaatatcaagccaactcctgttgtttctactccaagtaaa
gtgacagctgcagctatggctgggaataagtcaacaccgagggctagtatccgcccaatg
gttacacctgcaacagttacaaatccatctaccaccccaacagcgacagtgatgcccaca
acacaagtagaatcacaggaagctatgcagtcagaggggcctgtggaacatgttccagtt
tttggaagcacaagtgggtctgttcgttcaactagtcctaatgtccagccttccatttct
caaccgattttaactgttcagcaacaanaccaggctacagcttttgtgcagcccactcaa
cagagtcatcctcagatcgagcctgcaaatcaagagttatcctcaaacatagtcgaggtt
gttcagagttcaccagttgagcggccttctacttccacagcagtatttggcactgtttca
gctacaccaagttcctctttgccaaagcgtacacgtgaagaggaagaagatagcaccata
gaagcatcagaccaagtctctgatgatacagtggaaatgcctctttcaaagaagctgaaa
actgttacacctgtaggtactgaggaagaagctatggcagaggaaagtactgatggagag
gtagagactcaagtatacaaccaggattctcaagattccattggagaaggagtaacccag
ggagattatacacctatggaagacagtgaagaaacttctcaatctctacaaatagatctt
ggaccgcttcagtctgatcagcatataactttatcccaggatggtcaaggcaaaggagat
gatgttattgtaattgacagtgatgatgaagaagatgatgatgatgaaaatgatggagaa
catgaggattatgaagaagatgaagaagacgacgatgatgacgaagatgacactgggatg
ggagacgagggtgaagacagcaatgaaggaactggtagtgcagatggtaatgatggctat
gaagctgatgatgctgagggtggtgatgggactgatccaggtacagaaacagaagaaagt
atgggtggaggtgaaagtaatcagagagctgctgattctcaaaacagtggtgaaggaaat
acaggtgcagcagagtcatctttttcccaggagactgctagagaacagcagccatcatca
gcatctgaaagacagactcctcgagcaccccagtcaccaagacgcccaccacatccactt
cccccacgcctgaccattcacgctccacctcaagagttgggaccaccagttcagaggatt
cagatgactaggaggcaatctgtaggacgtgggcttcagttgactccaggaataggtggc
atgcagcagcatttttttgatgacgaagatagaacagttccaagtactccaactcttgtt
gtgccacatcggactgatggatttgctgaagctattcattccccacaggttgttggtgtt
cctagattccggtttgggccacctgaagatatgccacaaacaagttctagtcactcggat
cttggccaacttgcttctcaaggaggtttaggaatgtatgaaacaccccttttcctagct
catgaagaagagtctggtggccgaagtgttcctactactcctctacaagtagcagcccca
gtgactgtatttactgagagtaccaccaatgatgcttcagagcacgcctctcagtctgtt
cccatggtgacaacatccactagcactttatccacaacaaatgaaacagcaacaggtgat
gacggagatgaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggccta
gaaattgatagccagcaggaagaagagcctgttcaggcatctgatgagtcagacctccct
tctaccagccaggatcctccttccagctcttctgtagatactagcagtagtcaaccaaag
cctttcagacgagtaagacttcagaccacattgagacaaggtgtccgtggtcgtcagttt
aacagacagagaggtattagccatgcaatgggaggaagaggaggaataaatagaggaaat
attaattaa
DBGET
integrated database retrieval system
