Castor canadensis (American beaver): 109685665
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Entry
109685665 CDS
T04791
Symbol
Acin1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan03015
mRNA surveillance pathway
ccan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109685665 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
109685665 (Acin1)
03015 mRNA surveillance pathway
109685665 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109685665 (Acin1)
03041 Spliceosome [BR:
ccan03041
]
109685665 (Acin1)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109685665 (Acin1)
Spliceosome [BR:
ccan03041
]
Complex C
Other components
EJC/TREX
109685665 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
109685665
NCBI-ProteinID:
XP_020018192
UniProt:
A0A8B7UFX3
LinkDB
All DBs
Position
Unknown
AA seq
1335 aa
AA seq
DB search
MWRRRHPSYSGGNRGVLSGNREVDYGSGRGQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSFSEEKGESDDEKPRKGERRSSRVRQARAAKLS
ECSQTAEEEEDQETPSRNLRVRTDRNLKIEEEEEEEEEDDEEEEEDDEEQKSKETKILKQ
VEEETPRGKPEEVMDERPKTIRSQEQEGLERGGRVTRSQEEARRSHLARQQQEREMQVVS
TLEEEKREVKSSQSSEEKSQSPSPPRLTEDVEKAPLVLQAEQAASEEETPPPLLTKEASS
PPPHVQLQSGEETEPMEGPAPPVLIQLSPRNTDNESRELLLPQHTVQFVGALSPLSSPAD
TKAESTTEKVSEESVLPLVQKTTVAEYSPQKGLETESEKSAQPLPLKMEELAPAKEITEE
SLKQQSLEQKEGRRASHTHFPSHRLKQSPDSSSSRSSSSSSSSRSRSRSPDSSGSQSHSS
PRSKQRDVSQAQVHANPRGRPKTVSRSTSESRSRSRSRSRSASSSSRKSLSPGVSRDSST
SHTETKDSSSGQEVAAPPVSQLQVLEPKQRISTSSSSILVRRLSQPEPAEKHVTQRLQPE
RGSPKKCEAEEAEPPAATQPQISETQASHMPESERIHHTVEEKEEVTMDTSENRPENEVP
ETPMPIADQVSNDDRPEGSAEDEEKKESLLPKSFKRKISVVSATKGVPTGNSDTEGGQPG
RKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNG
DDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVPPQLSVEVALPQPVEH
EVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLG
QLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADY
AEQDELDYHRGLLVDRPSETKTEEQGIPRPLHPPPPPPVQPPPHPRAEQREQERAVREQW
AEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAXSKEKKSEKKEKAQEEP
PAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKE
AERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRDTKRHSR
SRSRSTPVRDRGGRR
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggagacacccgagctattccggaggaaaccggggtgttctgagtggtaat
cgagaggtagactatggcagtgggcggggtcagctcggtacattcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcattggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacattcaacaccccatgctgca
ttccagccaaattcccagattggggaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggaactacttagacagcgtttggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcagaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcacccaggaagagctcttctttttctgaagagaagggtgaatctgatgatgagaaa
ccgaggaaaggagaaagacgatcttctagggtcagacaggcaagagcagctaaactttct
gagtgcagccagactgctgaggaagaagaggatcaagaaacaccttctagaaatctgagg
gtcagaacagatcggaatttgaaaatagaagaggaagaagaggaggaggaagaagatgat
gaagaggaggaggaagatgatgaggaacagaaatctaaggaaacaaaaatcctgaaacag
gttgaagaagagacacccagaggaaaaccagaagaagtaatggatgagagacccaaaacc
ataagatcccaggaacaagagggattggagagaggggggcgagttacaagatcccaggaa
gaagctagaagaagtcatctggccagacagcagcaagagagagagatgcaagtagtttct
acacttgaggaggaaaaaagagaagtaaaatcttcacaaagttcagaggaaaaatcacag
tctccttcccctcctcgactgactgaagatgtggagaaggccccccttgtgctacaggca
gagcaagcagccagtgaggaggagactcccccacctttacttaccaaggaagcatcttct
ccaccacctcacgtgcagcttcagagtggagaagaaaccgagcccatggaaggtccagca
ccccctgtccttattcagttatctcctcgtaatacagataatgagtccagggagttgtta
ctgcctcagcatactgtccagttcgtgggagccctgtctcctttgtcaagtcctgcagac
accaaagcagaatctacaacagagaaagtgtcagaggagagtgtcctgcctctagttcag
aaaaccacagtggctgaatactcaccccaaaagggtcttgaaactgaatcagaaaaatct
gctcagccactccctctaaaaatggaggaattagctccagccaaagagatcactgaggaa
tctctgaaacagcagtctttagaacagaaggaaggcagaagggcttctcatactcatttc
ccaagtcacagattgaaacagtcacctgactcatcctctagccggtcctcctcttcatcc
tctagttctagatccaggtctcgctctcctgatagttcaggctcccagtctcactcgtct
ccaagatctaagcagagagatgtatcccaggcacaagttcatgccaaccctcgtggtaga
cccaaaacggtctccagatcaacatcagagtccaggtcacgttcccgatcccgttcccgt
tccgcatcaagcagcagcagaaaatctctaagtcctggagtttccagggacagcagcacc
agccacactgaaaccaaagattcctcttctggtcaggaggttgcagctccaccagtgtca
cagctgcaggtccttgaaccaaagcagaggatttccacctcctcatcctctatcctagtg
aggcgactgagccagcccgaaccagccgaaaagcatgtgacccaaaggttacagcctgaa
cgggggagcccaaagaagtgtgaagctgaagaggcagagccaccagctgccacacaacct
caaatctcagagactcaggcctctcatatgccagaatcagaaaggattcatcacactgtt
gaggagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaaatgaggttcca
gagactcccatgcctattgcagaccaagtcagcaatgatgaccgcccagagggcagtgct
gaagatgaggagaagaaagagagtttgctgcccaaatcattcaagaggaagatctccgtt
gtctcagctaccaagggggtgccaactggaaacagtgacacagaggggggccagcctggt
cggaagagacgttggggagccagcacagccaccacacagaagaaaccttccatcagtatc
accactgagtcactcaagagcctcatccccgacatcaaacccctggcggggcaggaggct
gttgtggatcttcatgctgatgactcccgaatctctgaggatgagacagagcgtaatggt
gatgatgggacccacgacaagggactgaaaatatgccggacggtcactcaggtagtacct
gcagagggccaggagaatgggcagagggaagaagaggaagaagagaaggagcctgaagca
gaaccccctgtacctccccagttgtcagtggaggtggccttgccccaacctgtggagcat
gaagtaaagaaagtgactttaggggataccttaactcggcggtccattagccagcaaaag
tctggagtttccattacaattgatgacccagtccgaactgcccaggtgccctccccaccc
agaggcaagatcagtaacattgtccatatctccaatttggttcgtccttttactttgggc
caactgaaggagctgctagggcgtacaggaacgttggtggaagaggccttctggattgac
aaaatcaaatctcattgcttcgtcacgtactcaacagtagaggaagccgtggccacccgt
acagctctgcatggggtcaagtggccccagtccaatcctaaattcctttgtgctgactat
gctgagcaagatgagctggactatcaccggggcctcttggtggaccgcccctctgaaacg
aagacagaggagcagggcataccacggcccctgcaccccccgcccccacccccagtccag
ccaccaccccacccacgggcagagcaacgggaacaggagcgggctgtgcgagagcagtgg
gcagagcgtgaacgggaaatggagcggcgagagcgaactcgatcagagcgtgaatgggat
agggacaaagttcgagaagggccccgttcccgatcacggtcccgtgaccgccgccgaaag
gaacgtgcannatctaaagaaaagaagagtgagaagaaagagaaagcccaagaggagcca
cctgctaagttgctggatgaccttttccgtaagactaaggcagctccctgtatctattgg
ctcccactaacagacagccagattgttcagaaggaggcagaacgggctgaacgggccaaa
gaacgggagaagcggcgaaaggaacaagaagaagaagagcagaaggaacgggagaaggaa
gctgaacgggaacggaaccgacagctggagagggagaaacgtcgggagcacagccgagag
agggacagggagagagagagggaaagggagcgggacaggggggaccgagatcgggatagg
gaaagggaccgggaacgaggcagggagcgggatcgcagagacaccaagcgccacagcaga
agcaggagtcggagcacaccagtgcgggaccggggcggtcggcgctag
DBGET
integrated database retrieval system
