Castor canadensis (American beaver): 109685879
Help
Entry
109685879 CDS
T04791
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109685879 (Supt6h)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109685879 (Supt6h)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109685879 (Supt6h)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109685879 (Supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
HHH_3
S1
Tex_N
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
109685879
NCBI-ProteinID:
XP_020018548
UniProt:
A0A8C0VYX0
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQETCDYLDRGQPSSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYICSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLSEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSCDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQANTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagtgaggctgaggagtcagaggaagaatataatgatgaaggc
gaggtggtgccccgagtcaccaagaagtttgtggaagaggaggatgatgatgaggaggaa
gaggaggagaacctggatgatcaagatgagcaaggcaacctgaaaggctttatcaatgac
gatgatgatgaagatgaaggggaagaggatgagggcagtgattctggtgattcagaagat
gatgttggacataagaagagaaaacgcacatcttttgatgaccgcttggaggatgatgat
ttcgacctcattgaggagaatttgggtgtcaaagtcaaacgaggacaaaagtatcggcgt
gtcaaaaaaatgtcagatgatgaagatgatgatgaagaggaatatggcaaggaggaacat
gagaaagaggctattgcggaggaaatcttccaggatggagaaggggaagaaggacaagaa
gctgtggaggcccccatggctcctccagaggaagaggaggaagatgatgaagagtcagat
attgatgacttcattgtggatgatgatggacagcctctgaaaaaacctaagtggcggaaa
aagctccctggatacacagatgcagccctgcaggaagcccaggagatctttggtgtggac
tttgactatgatgaatttgagaaatacaatgagtatgatgaagaactggaggaagaatat
gagtatgaggacgatgaggctgagggtgaaatccgagtacgccccaagaagaccaccaag
aagcgtgtaagccgcaggagtatctttgagatgtacgagcccagtgaactggaaagcagc
catctcacagatcaggacaatgaaatccgagccactgacctgcctgagaggttccagctt
cgctccatccctgtcaagggggctgaagacgatgaactagaagaagaagctgactggatc
tacagaaatgcctttgccacaccaaccatttctctacaggaaacctgtgattacctagac
cgagggcagccatccagcagcttcagtcgaaaagggcccagcacaattcagaaaatcaaa
gaggctctgggcttcatgagaaatcagcattttgaggttccttttattgccttctaccga
aaggagtatgtggaacctgagttgcacatcaatgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggatccgcaaagagaacctaacacggttatttgagaagatg
caggcttatcagtacgagcaaatctctgctgaccctgacaaacctctggctgatggcatc
cgggctcttgacaccactgacatggagagacttaaggatgtacagtcaatggatgaactg
aaagatgtctataaccatttcctgctttattatggtcgtgatatccccaagatgcagaat
gctgccaaggctagccgcaaaaaactgaagcgtgtacgagaagagggagatgaagaaggt
gaaggtgaggaggcagaagatgaggagcagaggggaccagagctcaagcaggcgtcccgc
cgagacatgtataccatctgccaaagtgcagggctagatggcctggccaagaagtttggg
cttactcctgagcagtttggagaaaacctccgagacagctaccaaaggcatgagacagaa
cagttccctgcagagcccttggagctggccaaggattacatttgcagccagttccctact
ccagaagctgtgctagaaggtgcccgttacatggtagcactgcagattgcccgggaaccc
cttgtccggcaggtgctgaggcaaaccttccaagagagagccaagctaaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccactacgcttattcctttaagtactta
aagaacaagcctgttaaagaactgagagatgaccagtttcttaagataggcctggctgaa
gatgaaggactgcttaccattgacatcagcatagatatgaaaggagtggaaggctatggc
aatgaccagacatattttgaagagatcaaacagttttactaccgggatgagttcagccac
caggtgcaggagtggaaccggcagcgcaccatggccattgagcgtgctttacagcagttc
ctctatgtgcagatggccaaagagctcaagaacaagctgctgtctgaagccaaggaatat
gtcataaaggcctgtagccgaaagctctacaactggttgagagtagcgccctaccgacca
gatcagcaggttgaagaagatgatgattttatggatgagaaccaagggaagggcattcga
gttctaggcattgctttttcctctgccagagatcaccctgtgttctgcgccctggtcaat
ggtgaaggagaagtgacagactttctccggctaccccattttaccaaacggcgaactgca
tggagagaagaagagcgggaaaagaaggctcaagatattgaaaccctaaaaaaatttctt
ctgaataagaaacctcatgtggtgacagttgcgggagagaacagggacgcccagatgttg
attgaggatgtgaagcgcattgtccatgagctggatcaaggccaacagctgtcttctatt
ggggtggagttggttgataatgagttggccattctctacatgaacagcaagaagtcagag
gcagaattccgagattacccaccagtcctgagacaggctgtctccctggcccggcgcatc
caagatcctctaatagagtttgcccaggtgtgcagctgtgatgaagatatcttgtgtctc
aaatttcatcccttgcaggagcatgtcgtcaaagaggagctgctcaatgccttatactgt
gaatttatcaaccgggtcaatgaggttggggttgatgtcaaccgtgctattgcccatcct
tacagccaggccctgatccagtatgtctgtggcctgggacctcggaaaggaactcatctg
ctaaagatcctgaagcagaacaacactcgacttgagagccggacccagctggtcacgatg
tgccacatgggtcccaaagtcttcatgaactgtgctggcttccttaagattgacacagcc
tccttgggggacagtactgactcatacattgaagttcttgatggttctcgtgtccaccct
gagacctatgagtgggccaggaagatggcagtggatgccctggaatatgacgaatccgct
gaggatgccaatcctgcaggagcccttgaagaaatcttggaaaacccagagcgacttaag
gacctagaccttgatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcacactttatgacatccgagcagagctgagttgtcggtataaggacctccggacagct
taccgctctcccaacacagaggagattttcaatatgttaaccaaagaaacaccagaaacc
ttttatattggaaagctcatcatctgcaatgtcactggtattgctcacaggcgcccacag
ggtgagagctatgaccaggccattcgcaatgatgagacagggttgtggcagtgccccttc
tgtcagcaggacaatttccctgaactaagcgaggtttggaaccactttgacagcggttca
tgccctggccaagctattggtgtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccagaggagcgagtaaaggtggga
atgactgttcactgccgcatcatgaagattgacatcgagaagttcagtgcagacttgacc
tgccgcacctcagaccttatggacagaaacaatgaatggaaacttcccaaggacacttac
tatgactttgatgctgaagcagcagaccacaagcaggaagaagacatgaagcggaagcag
cagcggaccacatacataaagcgagtgatcgcacacccatccttccacaacatcaatttc
aagcaagcagaaaagatgatggagaccatggaccagggagatgttatcatccgaccaagc
agcaaaggggagaaccacctgacagtaacctggaaagtcagtgatggcatctaccagcat
gtggatgtgcgggaggagggcaaggaaaatgccttcagcctgggagccactctgtggatc
aacagtgaggaatttgaagatttggatgagattgttgcccgctatgttcagcccatggca
tcctttgcccgggaccttctgaaccacaagtattaccaggactgcagtggtggggaccgc
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactcctgaaggattccggtaccgaggccagatc
ttcccaactgtgaatggactttttaggtggtttaaggatcactaccaggacccagtacca
ggcatcacccccagtagcagcagcaggacacggacccctgcctctatcaatgctacccca
gccaacatcaaccttgcagatctgacacgggctgtgaacgccttaccccagaacatgact
tcgcagatgttcagtgccattgctgccgtgacaggccagggacagaaccctaatgccacc
ccagctcagtgggcctccagccaatatggctatggtggcagtggaggaggcagcagtgcc
taccatgtgttcccaacgccagcccagcagccagtggccacaccactaatgactcccagc
tactcctacacaaccccaagccagcccatcaccacaccacagtaccaccagctccaagcc
aacaccaccccacagtctgctcaggcccaaccccagccttcttccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcagagcag
tggctacaggagaaggaggcagaacggcggaaacagaagcagcggctgacacctcggcct
tcccccagtcccatgatcgaaagcacccccatgtccattgctggcgatgcgaccccactc
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
