Castor canadensis (American beaver): 109685997
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Entry
109685997 CDS
T04791
Symbol
Srsf5
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03040
Spliceosome
ccan05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109685997 (Srsf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109685997 (Srsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109685997 (Srsf5)
Spliceosome [BR:
ccan03041
]
Common components
Common spliceosomal components
SR proteins
109685997 (Srsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DUF2202
Motif
Other DBs
NCBI-GeneID:
109685997
NCBI-ProteinID:
XP_020018734
UniProt:
A0A8B7UHF9
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS
WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIEGS
KRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSKSRSVSRSPVPEKSQKR
GSSSRSKSSASADRQRSWSWSRSRSVDSGN
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtcgagtgttcatcgggaggttaaatccagcggcgagggagaaagacgtg
gaaagatttttcaaggggtacggacggatcagagatatcgatctgaaaagaggctttggt
tttgtggaatttgaggatcctagggatgcggatgatgctgtatatgaacttgatggaaaa
gaactttgcagtgaaagggttactattgaacatgctagggctcggtctcgaggtggacga
ggtagaggacgctactctgaccgttttagtagtcgcagaccacgaaatgacagacgaaat
gctccacctgtaagaacagaaaatcgacttatagttgagaatttatcctcaagagtcagc
tggcaggatctcaaagatttcatgagacaagctggggaagtaacctttgcggatgcacat
cgacctaaattaaatgaaggggtggttgagtttgcctcttacggtgatttaaaaaatgct
attgaaaaactttctggaaaggaaataaatgggaggaaaataaaattaattgaaggcagc
aaaaggcacagtaggtcaagaagcaggtctcgatctcggaccaggagttcctctaggtct
cgtagccggtctcgttctcgtagtcgcaagtcttacagccgatcaagaagcaggagccgg
agccggagcaagtctcgttctgttagtaggtctcctgtgcctgagaagagccagaaacgt
ggttcttcaagtagatcaaagtcttcagcatctgcggatcgccagaggtcctggtcttgg
tccaggtccagatcagttgacagtggcaattaa
DBGET
integrated database retrieval system
