Castor canadensis (American beaver): 109686554
Help
Entry
109686554 CDS
T04791
Symbol
Atg16l2
Name
(RefSeq) autophagy-related protein 16-2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109686554 (Atg16l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109686554 (Atg16l2)
03029 Mitochondrial biogenesis [BR:
ccan03029
]
109686554 (Atg16l2)
Membrane trafficking [BR:
ccan04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
109686554 (Atg16l2)
Others
Specific organelles associated proteins
Auto phagosome
109686554 (Atg16l2)
Mitochondrial biogenesis [BR:
ccan03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109686554 (Atg16l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_NWD2_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_ACSF4
Golgin_A5
Fez1
Motif
Other DBs
NCBI-GeneID:
109686554
NCBI-ProteinID:
XP_020019503
UniProt:
A0A8B7UIU7
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MAGPGAPCAPAARWKRHIVRQLRQRDRTQKALFLELVPAYNSLLEKAELLAKFSEKLQRG
PNDVISTIHQSSWEESGLDSDQVSSPATLRVKWQEEKEGLQLVCGEMAYQVVEKNAALGT
LQSELEERQGRLAALEARVAQLQETRRQQALQVEERREQNAAQHAAYEALRAHAEHREAE
LRRLQEEARDLLERLVQRKARAAAERNLRNERRERANQARVSQELKKVAKRTVSISESSN
TPGDGIREGKETVAVGSESAFLESEGCEKWKRPFRSASATSLTLSRCVDVVKGLLDFKKR
RGHSIGGAPEQRYQSIPVCVAARLPTHARDVLDAHLSEINAVCFGPNSSLVATGGADRLI
HLWNVVGGRLKANQTLEGAGGSITSVDFDPSGAQVLASTYNQAAQLWNVGEAQSKETLSG
HKDKVTAAKFKLTKHQAVTGSRDRTVKEWDLGRAYCSRTINVVSYCNDVVCGDHIIISGH
NDQKIRFWDSRGPRCTQIIPVQGRVTSLSLSHDQLHLLSCSRDDTLKIIDLRVFNIRQVF
RADGFKCGSDWTKAVFSPDRSYALAGSWDGALYIWDVDTGKLESSLRGPHCAAVNAVAWC
FSGSHVVSVDQSRKVVLWH
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcccggcgccccctgcgcccccgccgcccgctggaagcgccacattgtgcgg
cagctgcggcagcgggatcgtacgcaaaaagcactcttcctggagctggtgccggcctat
aacagtctcctggagaaggctgagctgctggctaagttctcagagaagctgcagcgaggg
ccaaacgatgtcatctccaccatccaccagagctcctgggaggagtcagggctcgattca
gaccaagtctcatcaccagccaccctgagggtgaagtggcaggaggagaaggagggtctc
cagctggtctgtggtgagatggcctaccaggtggtggagaagaacgcagccctgggcacc
ctgcagtcggagctggaggagcggcaaggcaggctggcagctctggaggctcgcgtggcg
cagctgcaggagacgcgcaggcagcaggccctgcaggtggaggagcgacgggagcagaac
gccgcgcagcacgcagcctatgaggcgctgcgcgcgcacgccgagcaccgggaggcggaa
ctgcgcaggctccaggaggaggcgcgcgacctgctggagcggctcgtgcagcgcaaggcg
cgcgccgccgccgagcgcaacctgcgcaatgagcgccgggagcgggccaaccaggcgcgg
gtgtcccaggagctgaagaaggttgccaagcggactgtgagcatcagcgagagctcaaac
actccaggcgatgggatcagggaggggaaggagactgtggccgtgggcagtgagtcggca
ttcctggagagtgagggttgtgagaaatggaagaggcccttcaggtctgcctcagccacc
tctctgacactgtcccgctgtgtggatgtggtgaaggggctgctggatttcaagaagagg
agaggtcactcaattggaggtgcccccgagcagcgatatcaaagcatccctgtgtgcgtg
gctgcccgacttcctacccatgctcgggatgtcttggatgcccacctctctgagatcaat
gctgtttgttttggccccaacagcagccttgtggccactggtggggctgatcgtcttatc
catctttggaatgtcgtgggaggtcgcctaaaggccaaccagacccttgagggagctggt
ggcagcatcactagtgtggactttgacccctcgggcgctcaggttttggcatctacttac
aaccaggccgcccagctctggaacgtgggggaagcacagtccaaggagacactgtctgga
cacaaggacaaggtaacagctgccaaattcaagctaacgaagcaccaggcggtgactggg
agccgagaccggacagtgaaggaatgggacctcggccgcgcctactgttccaggaccatc
aacgtcgtttcctactgtaatgacgtggtatgtggggaccacatcatcattagtggccac
aatgaccagaagatccggttctgggacagcaggggaccccgctgtacccagatcatccct
gtgcagggccgggtcacctccctgagcctcagccatgaccagctgcatctgctcagctgt
tctcgtgatgatacactcaagatcatcgacctgcgtgttttcaatatccgccaggtgttc
agggctgatggcttcaagtgtggttctgactggaccaaagccgtgttcagccctgacaga
agctatgcactggcaggctcctgggacggagccctttacatctgggatgtagacactggg
aagctggagagcagccttcgggggccccactgtgctgctgtcaatgctgtggcctggtgc
ttctctgggagccatgtggtgagcgtggaccagagcaggaaggttgtgctctggcactag
DBGET
integrated database retrieval system
