Castor canadensis (American beaver): 109686565
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Entry
109686565 CDS
T04791
Symbol
Abca4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109686565 (Abca4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccan02000
]
109686565 (Abca4)
Transporters [BR:
ccan02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109686565 (Abca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_15
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
109686565
NCBI-ProteinID:
XP_020019517
UniProt:
A0A8B7UJM1
LinkDB
All DBs
Position
Unknown
AA seq
2269 aa
AA seq
DB search
MGFARQTQLLLWKNWTLRKRQKIRFVVELVWPLSLFFILIWLRNANPLYSQHECHFPNKA
MPSAGLLPWLQGVFCNVNNPCFQSPTPGESPGIVSNYNNSILARVYRDFQELFMDTPESR
HLVQVWTELRTLSQLMNALQTHPERFAGRGLQIQDILKDDETLTLFLTKNIGLSSSVAHL
LVSSQVRVEQFAHGVPDLALKDIACSQPLLDRFIIFSQRRGAQTVRGALCSLSPGILQWM
EDTLYANVDFFKLFHVLPTILDSSSQGINLRSWGRALSDMLPRIQEFIHRSSVQDLLWVT
RPILQKNGPETFTQLSGILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPIY
TYDKRTTPFCNALIQSLESNPLTKIAWMAAKPLLMGKILFTPDSPAVQRVLKNANSTFEE
LARLRKLIGVWGEVGPQIWSFFDKSTQITMIRDTLEHPTVKDFMNRQLGEEGVSAEAIRN
FLSKGPRESQGDDMINFDWRDMFNLTDRSLRLASQYLECLVLDKFESYDDEEQLTQRALS
LLEENRFWAGVVFPDMYPWTSALPRHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
LRYIWGGFAYLQDMVELGITRSQAQAKTPVGVYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMIVKGIVLEKELRLKETLKNHGVSNAVIWCTWFLDSFSIMAVSIFLLTIFIM
HGRILHYSDPLILFLFLLAFSTATITQCFLLSTFFSKASLAAACSGVIYFTLYLPHVLCF
AWQDRMTADLKKAVSLLSPVAFGFGTEYLVRFEEQGLGLQWDSIASSPMEGDEFSFLLSI
KMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPL
TEEMEDPEHPGGTNDSFFERELPGLVPGVCVKNLVKIFEPGSRPAVDHLNITFYENQITA
FLGHNGAGKTTTLSILTGLLPPTAGTVLIGGKDIETNLDEVRQSLGMCPQHNVLFHHLTV
AEHILFYTQLKGKSWEEAQLEMESMLEDSGLHHKRNEEAQDLSGGMQRKLSVALAFAGDC
KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYC
SGTPLFLKNCFGTGFYLTLVRKMKNIQSHRCGCEGTCSCASKGFSFRCPTQVNEISAEQV
LDGDVSELMDVVCHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLS
SFGISDTPLEEIFLKVTEDSDSGSLFAGGTQQKMEPVSLGHPCLGPSKKVGQPAQGSREQ
ATPPEGHPSLEPKEPGSPLNTGVRLVLQHVQALLVKRFHHAVRSHKDFLAQIVLPATFVF
LALMLSLLVPPFGEYPALTLHPWMYGQQYTFFSMDKPGSEHLAVLADVLLNRPGFGNRCL
KDEWLPEYPCGNSTPWKTPSVSPNITHLLQKQKWTPANPSPSCRCSTREKLIMLPGCPEG
AGGLPPPQRTQNSSDILQDLTNRNLSDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGT
LPAPPFTGEALVGFLSDLGWIMNLSGGPNTREASQEMSHFLHDLETEDNIKVWFNNKGWH
ALVSFLNVAHNAILRANVPKDRNPEEYGITVISQPLNLTKEQLSEITVLTTSVDAVVAIC
VIFAMSFVPASFVLYLIQERVSKAKHLQFISGVSPTTYWLTNFLWDIMNYAVSAGLVVGI
FIGFQKKAYTSPQNLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFTGIN
SSAITFILDLFENNQTLLRFNAGLRKLLVIFPHFCLGRGLIDLALSQAVTDVYARFGEEH
SSNPFQWDLIGKNLVAMAVEGVLYFLLTLFIQHHFFLTRWIAEPAKEPIVDEDDDVAEER
QRIMSGGSKTDILRLNELTKVYSGSSSPAVDRLCIGVHPGECFGLLGVNGAGKTTTFKML
TGDTTVTSGDATIAGKSIPTNMSEVHQSMGYCPQSDAIDDLLTGREHLYLYARLRGVPAE
EIEKVANWSIQSLGLSVYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQA
RRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRVAILVKGTFQCLGTIQHLKYKFGDGY
IVTMKIKSPREDLPPDLNPVEQFFQGNFPGSVQRERHYNMVQYQVASSSLARVFQLLISH
KDSLLIEEYSVTQTTLDQVFVNFAKQQTETFDLPLHPRAAGTNQQAKVL
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgccagacagacacagcttttgctctggaagaactggaccctgcgaaaaagg
caaaagattcgctttgtggtggaactcgtgtggcctttatctctgtttttcatcttgatc
tggctaaggaacgccaacccactctacagccagcatgaatgccattttccgaacaaggcg
atgccctcggcgggattgttgccctggctccagggggttttctgcaacgtgaacaatcct
tgttttcaaagccccaccccgggagaatctcctggaattgtgtcgaactataacaactcc
atcttggcaagagtgtaccgagattttcaagagcttttcatggacacaccagagagccgg
caccttgtccaggtctggacagagctccgcaccttgtcccagctcatgaatgccctgcag
actcatcccgagagatttgcaggaaggggactacaaattcaggatatcctaaaagatgac
gagacactgacactgtttctcacgaagaacattggcctgtccagctcagttgcccacctt
ctggtcagctcccaagtccgtgtggagcagtttgctcatggagtcccagacctggctctg
aaggacattgcctgcagccagccactcctggaccgcttcatcatcttcagccagcgtcgc
ggggcacagactgtgcgtggtgccttgtgctccctctccccgggcatcctgcagtggatg
gaagatactctgtatgccaacgtggacttcttcaagctcttccacgtgcttcctaccatc
ctagacagcagttctcaaggtatcaatctgagatcctggggaagagcattatctgatatg
ttgcctaggattcaagagtttatccatcggtcaagtgttcaagatctgctgtgggtgacc
agacctatcctgcagaagaatggtcccgagaccttcacgcagctgtcgggcatcctgtct
gacctcctgtgcggctacccagagggagggggttctagggtgttctccttcaactggtac
gaagacaataactataaggccttcctggggattgactccacaaggaaagatcctatctac
acttatgacaaaagaacaacacccttctgcaatgcattgatccagagcctggagtcaaac
cctctaaccaaaatagcatggatggcagcaaagcctttgctgatgggaaaaatcctcttc
actcctgactcccctgccgtgcaaagggtcctgaagaatgccaattcaacttttgaagag
ctggcgcgcctcagaaagctgattggagtctggggagaagtgggcccccagatctggtcc
ttctttgacaagagcacacagataaccatgatcagggataccctggagcacccaacagta
aaagacttcatgaatagacagcttggcgaagaaggcgtttctgctgaagccattcgaaac
ttcctctccaagggtccccgagagagccagggtgacgacatgatcaactttgactggagg
gacatgttcaacctcacagaccgctccctacgcctggctagtcaataccttgagtgcctg
gtcctggacaagttcgagagctatgatgacgaagagcaactcacccaacgagctctgtct
ctgctggaggaaaacaggttctgggccggtgtggtgtttcccgacatgtatccctggacc
agcgccctaccacgccacgtgaagtacaagatccggatggacatagacgtggtggagaaa
accaataagatcaaggacagatactgggattctggtcccagggcagaccccgtggaagac
ctccggtacatctggggaggctttgcctatctgcaggacatggtcgagctgggcatcacg
aggagtcaggcccaggcaaaaactccggttggagtctacctccagcagatgccctacccc
tgcttcgtggatgactctttcatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcatggatctactctgtctccatgatcgtgaagggcattgtcttggaaaaggagtta
aggctgaaggagaccttgaaaaatcatggcgtctctaacgcagtgatctggtgcacctgg
ttcctagatagcttctccatcatggccgtgagcatcttcctcctgactatattcatcatg
cacgggaggatcctgcattacagcgaccctctcatcctcttcctcttcctgttggcgttc
tccacggccaccatcacgcagtgcttcctgctcagcactttcttctccaaggccagcctg
gccgcagcctgcagtggagtcatctacttcactctctacctgccacatgtcctgtgcttt
gcctggcaggaccgaatgacggctgatctgaagaaagcagtgagcctcctgtcccctgtg
gcctttgggtttggcactgaatacctggtccgcttcgaggagcaaggcctggggctgcaa
tgggacagcattgccagcagccccatggaaggggacgagttcagcttcctgctgtccatc
aagatgatgcttctggatgctgctctgtacggcctgcttgcctggtaccttgaccaggta
tttccaggagactatggaactccacttccttggtacttccttctccaagagtcttactgg
cttggtggtgaagggtgttcgaccagagaagagagggccctggaaaagacagaacccctg
acagaggaaatggaggatccagagcacccagggggaacaaatgactctttcttcgaacgt
gagcttccggggctggttcctggggtgtgtgtgaagaacctggtgaagatttttgagccc
ggtagccggccagccgtggaccatctgaacatcaccttctacgagaaccagatcactgca
tttctcggtcacaatggggcggggaaaaccaccaccttgtccatcctcacaggtctgctg
ccaccgacagcagggactgtgctcatcgggggaaaggacattgaaaccaacctggatgaa
gtccggcagagtcttggcatgtgtcctcaacacaacgtcctgttccaccacctcacggtg
gccgagcacatcctgttctacacccagctgaaagggaagtcctgggaggaggcccagctg
gagatggagagtatgttagaggactcaggcctccaccacaagaggaatgaagaagcccag
gacctctcaggtgggatgcagaggaagctgtctgtggccctggccttcgcgggagattgc
aaggtggtcgttctggatgagcccacctctggggtggacccctactccaggcgctccatc
tgggacctgctgctgaaatatcgctcaggcagaaccatcatcatgtccactcaccacatg
gatgaggctgacctgctcggggaccgcattgccatcatctcccagggaaggctctactgc
tcgggcaccccgctcttcctgaagaactgctttggcaccggcttctacttgaccttggtt
cgaaaaatgaaaaatattcagagccacagatgcggctgtgaggggacctgcagttgtgcg
tccaagggtttctccttcaggtgtccaacccaagtcaatgagatttctgcagagcaagtc
ttggatggggatgtgagtgagctgatggacgtggtttgccaccatgttccagaggcaaag
ctggtggaatgcatcggtcaggaactcatcttccttctgcccaacaagaatttcaagcag
agagcctacgccagccttttcagagagctggaagagacgctggctgacctggggctcagc
agttttggaatttctgacactcccctggaagagattttcctgaaggtcaccgaggactct
gattcgggatctctgtttgctggtggcactcagcagaaaatggagcccgtcagcctagga
cacccctgtttgggtcccagcaagaaggtggggcagccggcccagggctcccgggagcag
gccactccccccgagggccacccttccctggaacccaaggagcccggctcccccctcaac
accggggtgcggctagtcctacagcacgtgcaggcgctgctggtcaagcggttccaccac
gccgtccgcagccacaaggacttcctggcccagatcgtgctcccggccaccttcgtgttt
ctggcactgatgctgtcgctcctcgtgcctccttttggtgaatatcctgctttgaccctt
cacccctggatgtacgggcagcagtacaccttcttcagcatggacaagccgggcagtgag
cacctcgcggtgctggcagacgtcctcctgaacaggcctggctttggtaaccgctgcctg
aaggatgagtggctcccggagtacccctgtggcaattcaaccccctggaagactccctct
gtgtccccaaacatcacccacctgttgcagaagcagaagtggacgccagccaacccctca
ccgtcctgcaggtgcagcaccagagagaaactcatcatgctgcctgggtgcccggagggt
gccggggggctcccgccaccacagagaacgcagaacagctctgacatcctgcaggacctg
accaacaggaacctttccgactacctggtaaaaacgtaccctgctctcatacgaagcagc
ttgaagagcaaattctgggtcaatgaacagaggtatgggggtatctccatcggaggaacg
ctcccggctccccccttcaccggggaggcacttgttggctttttaagcgaccttggctgg
ataatgaacttgagcgggggccctaacaccagagaggcctcccaagaaatgtctcatttc
ctccatgatctcgaaactgaagacaacattaaggtgtggtttaacaacaagggctggcat
gccctggtcagctttctgaatgtggcccacaatgctatcctacgggccaatgtgcccaag
gacagaaaccctgaggagtacggcatcacagtcatcagccagcccctgaacctgaccaag
gagcagctgtctgagatcacagtgctgaccacttcagtggatgccgtggttgccatttgc
gtcatttttgccatgtcctttgtcccagccagctttgtcctctacttgatccaggagcgg
gtgagcaaggcaaagcatctgcagttcatcagtggggtgagccccaccacctactggctg
accaacttcctctgggacattatgaattacgccgtgagcgcggggctggtggtgggcatc
ttcatcgggtttcagaagaaagcctacacttctccacagaaccttcccgctctcgtcgct
ctgctaatgctgtatggatgggcagtcattcccatgatgtacccagcgtccttcctgttt
gatgtccccagcacagcctatgtggctttgtcgtgtgcaaatctgttcacgggcatcaac
agcagtgccatcaccttcatcctggacttgttcgagaacaaccagactctgctcaggttc
aacgccgggctgaggaagctgctggttatctttccccacttctgcctgggccggggcctc
attgacctggcgctgagccaggctgtgacagacgtctatgcccggtttggagaggagcac
tcctcaaatccattccagtgggacctgattgggaagaacctggttgccatggcagtggaa
ggggttctgtacttcctcctgacgctcttcatccagcaccacttcttcctcacccgatgg
attgccgagcctgccaaggagcctattgtggatgaagatgatgacgtggctgaagaaaga
caaagaattatgagtggggggagcaaaactgacatcttaaggctaaatgaactcaccaag
gtatattcgggctcttccagcccagcggtggacaggttgtgcattggggtccaccctgga
gagtgctttggcctcctgggagtgaatggtgctggcaaaacaaccacgttcaaaatgctc
actggggacaccaccgtgacctcaggggatgccaccatagcaggcaaaagcatcccgacc
aatatgtctgaggtgcatcagagcatgggttactgtccccagtctgatgcaatcgatgac
ttgctcacgggacgagagcacctttacctgtacgcccggctccggggtgtgccagcagag
gaaatcgagaaggttgcaaactggagtattcagagcctggggctgtctgtctacgcggac
cgcctggcgggcacttacagcgggggcaacaaacgcaaactgtccacagccattgcactc
atcggctgcccgccactggtgctgctggatgaacccaccacagggatggacccccaggca
cgccgtatgctttggaacaccatcgtgagcatcatcagagaggggagagctgtggtcctc
acctcccacagcatggaagagtgcgaggccctgtgtacacgggtggccatcttggtgaag
ggcacctttcagtgtctgggcaccattcagcacctcaagtacaagtttggagatggctac
attgtcacaatgaagatcaaatcccccagggaggacctgcctcccgacctgaatcctgtg
gagcagttcttccagggcaacttccccggcagtgtgcagagggagaggcactacaacatg
gtgcagtaccaggtcgcctcctcctccctggccagggtcttccagctgctcatctcccac
aaggacagcctgctcattgaggagtactctgtcactcagaccacgctggaccaggtgttt
gtgaactttgctaagcagcagactgagacgttcgacctccccctgcacccaagggcggcg
ggcaccaaccagcaagctaaggtactgtga
DBGET
integrated database retrieval system
