Castor canadensis (American beaver): 109686832
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Entry
109686832 CDS
T04791
Symbol
Vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan05017
Spinocerebellar ataxia
ccan05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109686832 (Vldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
109686832 (Vldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109686832 (Vldlr)
Membrane trafficking [BR:
ccan04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109686832 (Vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
109686832
NCBI-ProteinID:
XP_020019943
UniProt:
A0A8B7UK39
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MKAPTHAFWGTCICNLLPLNLCFSKCSFLILGRKAKCESSQFQCTNGRCITLLWKCDGDE
DCVDGSDEKNCVKKTCAESDFVCNNGQCIPNRWQCDGDPDCEDGSDESPEQCHMRTCRIN
EISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQ
DDCNDGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIH
TKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQ
CNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDILKVCNQEQDCRDWSDEPLKECH
VNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKICGDIDECQNPGICSQICINLKGG
YKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDA
DIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKT
ISVATVDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVT
LDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDR
VYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCE
YLCLPAPQINDHSPKYTCSCPNGYNLEENGRKCQSTGTTVAYSEKKDTDTTEIPATSGLV
PGGIGFGINVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNF
DNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccctacccatgcattttggggaacttgcatctgtaatttgttacctttaaat
ctttgcttttctaaatgttcctttctgatcctagggagaaaagccaaatgtgaatcctcc
caattccagtgcacgaatggccgctgcattactctgctatggaaatgtgatggagatgaa
gactgtgttgatggcagtgatgaaaagaactgtgtaaagaagacatgtgctgagtctgac
ttcgtgtgcaacaatggccagtgtattccaaaccgatggcagtgtgatggggatcctgac
tgtgaagatggttctgatgaaagtccagaacagtgccatatgagaacatgccgcataaat
gaaatcagctgtggcgcccgttctactcagtgtatcccagtgtcctggagatgtgatggt
gaaaatgattgtgacagtggagaagatgaagaaaactgtggcaatataacgtgtagccct
gatgagttcacttgctccagcggtcgctgcatctccaggaactttgtgtgcaatggccag
gatgactgtaatgatggcagtgacgagcttgactgtgccccaccaacctgtggtgcccat
gagttccagtgcagcacctcctcctgcatccccatcagctgggtgtgcgatgatgatgca
gactgctcagaccaatcagatgagtcccttgagcagtgtggccgccagccagtaatacac
accaaatgcccagccagcgaaatccagtgcggctctggggagtgtattcacaagaagtgg
cgatgtgatggggaccctgattgcaaggatggtagtgatgaggtcaactgtccttctcgg
acctgccgacctgaccagtttgaatgtgaggatggtagctgcatccatggcagcaggcag
tgtaatggcatcagagactgtgtcgatggttctgatgaagtcaactgcaaaaatgtcaat
cagtgcttgggtcctggaaaattcaagtgcagaagtggggaatgcatagatatcctcaaa
gtatgtaaccaggagcaggactgcagagactggagtgatgagcccctgaaagaatgtcat
gtcaatgaatgcttggtaaataatggtggttgttcccatatctgcaaagacctagttata
ggctacgagtgcgactgtgcagctgggtttgaactgatagatagaaaaatttgtggagat
attgatgaatgccaaaatccgggaatctgcagtcaaatttgtatcaacttaaaaggcggt
tacaagtgtgaatgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggca
gtaggcaaagagccaagcctgatctttactaatcgaagagacatcaggaaaattggcttg
gaaaggaaagagtatatccaacttgttgaacagctaagaaacactgtggctcttgatgct
gacattgctgctcaaaaactattctgggctgatctaagccaaaaagccatcttcagtgcc
tcaattgatgacaaagttggtagacatgttaaaatgatcgacaatgtctataatcctgca
gccattgctgttgattgggtgtacaagaccatctactggactgatgcggcttctaagact
atttcagtagctactgtagacggaaccaagaggaagttcctgtttaattctgacttgcga
gagcctgcctccatagccgtggacccattgtctggctttgtttattggtcagactggggt
gaaccagctaagatagaaaaagcaggaatgaatggatttgatagacgtccattggtgacc
ttggacatccagtggcctaatggaattacacttgatcttataaaaagccgtctctattgg
cttgactccaagttgcacatgctatccagtgtggacttgaatggtcaagatcgtaggata
gtgctaaagtctctggagtttctggctcatcctcttgcactaacaatatttgaggatcgt
gtctactggatagatggggaaaatgaagcagtctatggtgccaataaattcactggatca
gagctggctactctagtcaacaaccttaatgatgcccaagacatcattgtataccatgaa
ctcgtacagccatcaggtaaaaattggtgtgaagaagacatggagaatggaggatgtgaa
tacctctgtttgccagcaccacagattaatgatcattctccaaaatatacctgttcctgt
cccaatgggtacaatctagaggaaaatgggagaaagtgtcaaagtactggaactactgtg
gcttacagtgagaaaaaagataccgacacaacagaaattccagcaactagtggactagtt
cctggaggtattgggttcgggatcaatgtgaccactgcagtatcagaggtcagtgttccc
cctaaagggacttctgctgcctgggctatccttcctctcttgctcttagttatggcagca
gtgggtggctacttgatgtggcggaattggcaacacaagaacatgaaaagcatgaacttt
gacaaccctgtgtacttgaagaccactgaagaggatctctcaatagatattggtagacac
agtgcttctgttggacacacttacccagcaatatcagttgtaagcacagatgatgatctt
gcttga
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