Castor canadensis (American beaver): 109686980
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Entry
109686980 CDS
T04791
Symbol
Katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccan04812
]
109686980 (Katnb1)
Cytoskeleton proteins [BR:
ccan04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109686980 (Katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
eIF2A
WDR54
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_LRRK2
Beta-prop_NWD2_C
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
109686980
NCBI-ProteinID:
XP_020020158
UniProt:
A0A250Y499
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVAQDPVQDSRPITQQLPHPSAPLRRIYERPSTTCSKPQRVKHNSESERRS
PSSEEEREERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPLEDDTATAKDASKP
SPAMDMQFPVPNLEIPPRPPVVTSTPAPKSEPAIIPATRNEPIGLKASEFLPCLTTGSTQ
AVKISQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTSDIKTSVDSAVAIN
DLSVVVDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPL
ITDILAAPPSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSAFRELHLLMA
SLD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagacggcctggaagttgcaggagatcgttgcccatgcc
agcaatgtgtcctcactggtgctgggcaaggcctccggacggctgctggccacgggtggg
gatgactgccgcgtcaacctgtggtccatcaacaaacccaactgcatcatgagcctgacg
ggtcacacatcacccgtagagagtgtccgcctcaatacccccgaggagctcatcgtggcc
ggctcccagtcaggctccatccgcgtctgggacctggaagctgccaaaattcttcgcacg
cttatgggacacaaagccaacatctgtagcctagatttccacccctatggtgagttcgtg
gcctccggttcccaagacacaaacatcaagctctgggacataaggaggaaaggctgtgtc
ttccggtacaggggtcacagccaggctgtgcggtgtctccggttcagccctgatgggaag
tggttggcatcagctgcagatgaccacacagtgaagctctgggatctgactgctggcaag
atgatgtctgaattccctggtcacacggggcctgtcaacgtggtggagtttcaccctaat
gagtaccttctagcttctggcagctctgacaggacgatccgtttttgggatctggagaaa
ttccaggtggtgagctgcattgaaggagagccggggcctgttaggagcgtgctcttcaat
cctgatggctgctgcttgtacagcggctgccaggactcactgcgggtctacggctgggag
cctgagcgctgctttgatgtggtgcttgtcaactggggcaaggtggctgacctggccatc
tgcaatgaccagctgataggtgtggccttctcccagagcaacgtctcctcttatgtggtg
gacctgacgcgggtcactaggacaggcacagtggcccaggaccctgtgcaggacagccgg
cccataacacagcagctgcctcaccccagtgccccactccggcgcatctatgagcggccc
agcacaacatgcagcaagcctcagagggtgaagcataactcggagagcgagcggcgcagc
cccagcagtgaggaggagcgggaggagcgggagtctcgggcagagatccagaatgctgag
gactacaacgagatcttccagcccaagaacagcatcagccggacaccgccccggagaagc
gagcccttcccagcacccctggaggatgacacagccacagccaaggacgcctcaaagccc
agcccagccatggacatgcagttcccagtgccaaatcttgagatcccaccccggcccccg
gtcgtcacttccaccccggcacccaagagtgaacccgccatcattcctgccacgaggaac
gaacccatcgggctgaaggcctccgaattcttgccttgtctgaccaccggttccacgcag
gccgtgaagatctcccagcaggcagagctagtggatgaggatgccatgtcacagattcgc
aaaggccatgacaccatgtgcgtggtgctcaccagccgccacaagaatctggacactgtg
cgggcagtgtggaccacaagtgacatcaagacgtcagtggactctgctgtggccatcaat
gatctgtcggtggttgtggacctcctgaacattgtcaaccagaaagcttcactgtggaaa
ctggacctgtgtaccacggtgctgccacagatcgagaaacttctgcagagcaagtatgag
agctatgtccagacgggctgcacctccctgaagctgatcctgcagcggtttctgcccctc
atcactgacatcctggcagccccgccctcggtgggcgtggacatcagccgggaggagagg
ctacacaagtgtcggctgtgttacaagcagctcaagagcatcagtggcctcgtcaagagc
aaatcgggcctgagtggccgccacggcagtgccttccgagagctgcacctgctcatggcc
agtttggactga
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