Castor canadensis (American beaver): 109687168
Help
Entry
109687168 CDS
T04791
Symbol
Atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04136
Autophagy - other
ccan04140
Autophagy - animal
ccan05010
Alzheimer disease
ccan05014
Amyotrophic lateral sclerosis
ccan05016
Huntington disease
ccan05017
Spinocerebellar ataxia
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109687168 (Atg2a)
04136 Autophagy - other
109687168 (Atg2a)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
109687168 (Atg2a)
05014 Amyotrophic lateral sclerosis
109687168 (Atg2a)
05016 Huntington disease
109687168 (Atg2a)
05017 Spinocerebellar ataxia
109687168 (Atg2a)
05022 Pathways of neurodegeneration - multiple diseases
109687168 (Atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109687168 (Atg2a)
03029 Mitochondrial biogenesis [BR:
ccan03029
]
109687168 (Atg2a)
Membrane trafficking [BR:
ccan04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109687168 (Atg2a)
Mitochondrial biogenesis [BR:
ccan03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109687168 (Atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
109687168
NCBI-ProteinID:
XP_020020530
UniProt:
A0A8B7UQQ2
LinkDB
All DBs
Position
Unknown
AA seq
1942 aa
AA seq
DB search
MSWAWGPLWLQVSSSLLELFLSLVNVGCCHPLCQACAPVVPTPGAHHHSLPSSGCLLFTL
QLSPPPCAQSVNEVLESMDWPLELAEGFVGSIEVAVPWAALLTDHCTVRVSGLQLTLQPR
QGPGPGAADSQSWGSCMTTSLQLAQECLRDGLPEPSEPPQPLEGLEMFAQTIETVLRRIK
VTFLDTVVRVEHTPGDGEPGMAVEVHVQRLEYCDEAVRDPSQAPPVDVHQPPAFLHKLLQ
LAGVRLHFEEFPSQVKLPEPPLQIGSCSGYMELMVKIKQNEAFPGPKLEVAGQLGSLHLL
LTPRQLQQLQVLLSAVSLADPKDLADKLNKSRPLGAEDLWLIEQDLNQQLQAGAVVEPIS
PDPLTNPLFNLDSTDLFFSMAGLTSSVASAVSELSLSDVDLGSSVHSNMASRRLSALAHT
TGKAAPTPLPGTMRPDSLLKMTLGGVTLTLLQTSAPSSGPPDLATHFFAEFDASKDGPFG
SRDFHHLRPRFQRACPCSHVRLTGMAVQLSWELRAGSRGRRTTSTEVHFGQLEVLECLWP
RGSSEPEYTEILSFSSNLGSQASARPCAHLRHTQILRRVPKSRSRRSATCHCHSELALDL
ADFQADVDLGTLNRLAALLHLATTPPEPPATGLLTEPLPVTEQQTVFRLSAPRATLRLRF
PIADLRPERDPWAGRAVRAEQLRLELSEPQFRSELSSGPGPPGSTRLELICSDLHGIYED
GEKPPIPCLRVSKAPDPKSTGHKYFLPQVVVTLNPQSNGTQWETATEKGEELEMSTESPC
ELREPEPSPFSSKRTMYETEEMVIPGDPEEMRTFQSRTLALSRCSLELILPNAHIFLPSK
EVYESIYNRINNDLLMWEPADLLPTPGSTTHPTDFPGSSGFWHDSFKMCKSAFKLDSDSD
EEDAQFFSVGTSGAPQAPVPEPPSRHSQSTFSTLVTVLKGRITAFCEAKDEAGKRLEATH
GELVLDIEHGTIFSVSQYHSQPGLGYFCLEAEKATLYHRAAVDNYLQPSHLEPSSFAPPA
QLAPTIYPSEEGVTERGASGRKGQGQGSPMLSAAVRIHLDPHKNIKEFLVTLRLHKATLR
HYMALPEQSWHSQLLEFLDVLDDPVLGYLPPTVITVLHTHLFSCAVDYRPLYLPVRVLVT
AETFTLSSNIVMDTSTFLLRFILDDSALYLSDKCEVETLDLRRDYVCVLDVDLLELVIKT
WKGSTEGRLSQPLFELRCSTNVVHMHSCADSCALLANLLQYVTSAGDLHPPPRPASPTEI
AGQKVQLSESPASLSSFPPVETALINQRDLTDALLDTERSLRERAQPSGGPLPQASPISV
YLFPGERSGAQAPSSSPGVSTGTLGSCSEAKTEEKEEEGDGDTLDSDEFCILDAPGLGIP
PRDGEPVVTQLHPGPIVVQDGYFSRPLGSTDLLRAPAHFPVPSSRVVLREVSLIWHLYGG
RDFGPHPGHRARVGLTGHRGSPSRCSGPNRPQNSWRTQGGSGRQHQVLMEIQLSKVSFQH
EVYPEETATDTAPGQELEERPLSRQVLIVQELEIRDRLASSQINKFLHLHTSERLPRRTH
SNMLTIKALHVAPTTSLGGPECCLRVSLMPLRLNVDQDALFFLKDFFTSLAAGINPMVPG
ETSDAHPETRGRPSSPQEGQPEDVEMSGSQEAPGSGHSSAAEQQPIYFREFRFTSEVPIW
LDYHGKHVTMDQVGTFAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDI
RKNQLPGLLGGVGPMHSVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASA
ALELSNRLVQAIQATAETVYDILSPAAPISRSLQDKRSAQRLRRGQQPADLREGVAKAYD
TVREGILDTAQTICDVASRGHEQKGLTGAVGGVIRQLPPTVVKPIIVATEATSNVLGGMR
NQILPDAHKDHALKWRSEEAQD
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcttggggtcccctgtggcttcaggtcagctcctctctccttgaactcttc
ttgtccttggtgaatgtgggctgctgccaccccctctgccaggcctgtgcccctgttgtt
cccacgcctggagcacaccaccactcattaccgtcctctggctgtctcctcttcaccctt
cagctctcacctcctccgtgtgctcagtctgtgaacgaggtgctggagtcgatggactgg
ccactggagctggcagaaggctttgtgggctccatcgaggtggctgtgccctgggctgca
ctgctcacagaccattgcaccgtgcgtgtgtcaggccttcaactcaccctgcagccccgc
cagggtccagggccaggggctgctgactcacagagctggggttcatgcatgaccacaagc
ctgcagctggctcaggagtgtctgcgggatggactgcctgaaccctctgagccaccacag
cccctagaggggctggaaatgttcgcccagaccattgagactgtgctgcggaggatcaag
gtgaccttcctggacactgtcgtgagggtggagcacacgccgggtgatggggagcctggc
atggctgtagaggtccatgtgcaaagactggagtattgtgatgaagcagtgcgggaccca
agccaggcaccacctgtggacgtgcaccagccacctgccttcctgcacaaattgctgcag
ctggcaggggtccgtctgcactttgaggagttcccctcacaggtaaaactgccagagccc
cccttacagattggcagctgctcagggtacatggagctgatggtgaagataaaacagaat
gaggccttcccaggccccaagctggaagtggcaggacagctgggctccctgcacctgctc
ctgaccccacggcagctccaacagcttcaggtactgctcagtgctgtcagccttgcagat
cccaaagatctagctgacaagctgaacaagagccgcccactaggtgctgaagacctgtgg
ctgattgagcaggatctgaaccagcagctacaggcgggcgctgtggtagagcccatcagc
ccagaccctctgaccaaccccctcttcaacctggacagcactgacctcttcttctccatg
gctggtcttacaagcagcgtggcctcagccgtctctgagctctccctctctgatgtagac
ctgggctcctctgtgcacagcaacatggcctcccgtcgactctctgccctggctcacaca
acaggcaaggcagcccccactccccttccgggcaccatgcgccctgactcgctgctgaag
atgaccttgggtggtgtgaccctgaccttgcttcagacatctgccccatcttccggacca
cctgacctcgctactcacttttttgctgagtttgatgcctccaaggatgggccttttggg
tctcgagacttccaccaccttcggccacgtttccagagagcctgcccctgcagtcatgtc
cgactcacaggcatggccgtgcagctgtcctgggagctgcgggcaggcagccggggccgg
cggacaaccagcacagaagtgcactttgggcagctggaggtgctggagtgtctgtggccc
aggggctcttcagagcctgagtacacagagatcctaagtttctctagtaacctgggttcc
caggcctcagctcggccctgtgctcacctgcgccatacacagatcctgcgccgggtgccc
aagagccggtcccgacgctcagctacctgccattgccactcagaactggccctggatctg
gctgacttccaagcagacgtggatctggggaccctgaaccggcttgctgccctgctgcac
ctggccaccacaccccctgagccacctgccactggtctgctgacagaacccctgccagtc
actgagcagcagacagtgtttcggctctcagcaccccgggctaccctgaggctgcgcttc
cccattgctgacctgaggcctgagcgggacccttgggcaggccgggctgtacgggctgag
cagctgcggctggagctgagtgagccccagttccggtcagagcttagcagtgggcctgga
cccccaggctccactcgcctggaacttatctgctctgacctgcatggaatctacgaagat
ggggagaagccacccatcccctgcctgcgggtctccaaagccccagaccccaagagtact
ggacacaagtacttcctgccccaggtagtggtgaccttgaacccccagtccaatggcaca
cagtgggagacagccacagagaaaggcgaggagctggagatgtccactgaaagtccatgc
gagctgcgggagcctgagccctcgcccttctcctccaagaggaccatgtatgagacggag
gagatggtaatccctggagaccctgaagagatgaggactttccagagccggaccctggcg
ctgtcccgctgcagcctggaattgatcctgcccaatgcccacatcttcctacccagcaaa
gaggtctacgaaagcatctacaacaggatcaacaacgacttgctcatgtgggagcccgcg
gacctgcttcccacccctggctccaccactcaccccactgacttccctggctcctcaggt
ttctggcatgacagcttcaagatgtgcaagtcagcctttaagctggactcggactcagat
gaggaagatgcccagttcttctcagtggggacatcaggtgctccccaggctcccgtccct
gagcccccaagtcgtcactcacagagtaccttctctaccctggtgacagtgctaaaaggt
cggatcacagccttctgtgaggccaaggatgaggctgggaagcgcctggaggccacacac
ggggagctggtgctggatatagaacatggcaccatcttcagtgtctcccagtaccacagt
cagccggggcttggctacttctgcctggaagccgaaaaggcaacactttaccaccgagcg
gccgtggacaactatctgcagcccagtcacctggaaccatctagctttgctcccccggcc
cagctggccccaaccatctacccatcagaggaaggggtgactgagcggggagcctcaggc
cgcaagggccagggtcagggctcccccatgctgtctgctgctgtgcgcatccacctggac
cctcacaagaatatcaaggagttcctggtgacactgcggttgcacaaagctaccctgcgt
cattacatggccctgcctgaacagagctggcattcccagctgttggagttcttagacgtg
ctcgatgaccctgtgctgggctacctgcccccaacggtcatcactgtcctgcacacacac
ctgttttcctgcgccgtggactacaggcccctctacctccctgtgcgcgtccttgtcact
gctgagaccttcaccctctccagcaacattgtcatggacacgtcgaccttcctgctcagg
ttcatcctcgatgactctgccttgtacctgtccgacaagtgtgaggtggagaccctggat
ctgcggcgagactatgtgtgtgtcctggatgttgacctcctagagcttgtgatcaaaacc
tggaaggggagcactgagggcagactgagccagccgctgtttgagctgcgctgctccacc
aatgtggtgcatatgcacagctgtgccgactcctgtgccctgctggccaacctgctccag
tatgtaaccagcgcgggtgacctgcaccccccaccccggcccgccagccccacggagatc
gccggtcagaaggtacagctctccgagagccctgcctccctgtcctccttccccccagtg
gagacggccctcatcaaccagcgtgacctgactgacgccctcctggacactgagcgtagc
ctgcgagagcgggcccagccctcaggtggtccactccctcaagcctcacccatctcagtc
tacctgttcccaggtgaacggagtggggcccaggctccttcatcctctcctggggtctcc
actggcaccttagggtcctgctctgaggctaagacagaggaaaaggaggaggaaggggat
ggagacactctggacagtgatgagttctgcatccttgacgcccctggcctgggcatcccg
ccacgagatggggagcctgtggtgacacagctgcatccaggccccatcgttgtgcaggat
ggatacttctcacggccattgggcagcacagacctgctgcgggctcctgcccacttccca
gtgcccagcagtcgtgtggtgctacgggaggtttctcttatctggcacctctatgggggc
cgagactttggcccccaccctggacacagggcaagagttggcctcacaggccacaggggc
tccccttcccgctgctctggccccaaccgaccccagaactcctggcgcacacagggaggc
agtgggcggcagcaccaggtcctcatggagatccagctcagcaaggtgagctttcagcac
gaggtgtacccggaggagacagccacggacacagcccctggccaggagctggaagagcgg
ccactgtcccgccaggtgctcatcgtgcaggagctggagatccgagaccggcttgcctcc
tcccagatcaacaagttcctgcacctacacacaagcgagcggctgccacggcgcacacac
tcgaacatgctcaccatcaaagcgctgcatgtggctccaaccactagcctaggtgggcct
gagtgctgtctccgtgtctcactgatgcctctgcggctcaacgtggaccaggatgccctc
ttcttcctcaaggacttcttcaccagcctagcagctggtatcaaccccatggtcccagga
gagacctctgatgctcaccctgagacccgaggccggcctagcagcccccaggaagggcaa
cctgaggatgtggagatgagtggctcccaggaggccccaggcagtggccacagctctgct
gccgagcagcagcccatctatttcagggagttccgcttcacatctgaggtgcccatctgg
ctggattaccatggcaagcatgtcaccatggaccaggtgggcacttttgctggcctcctc
atcggcctggcccagctcaactgctccgagctgaagctcaagcgactctgttgccggcat
gggctcctgggtgtagacaaggtgctgggctatgctctcaatgagtggctgcaggacatc
cgcaagaaccagctgcctggcctgctgggaggtgtgggccccatgcactcggttgtccag
ctcttccaagggttccgggacctgctgtggctgcccattgagcagtaccggaaggatgga
cgcctcatgcggggactgcagcgtggggctgcctcctttggctcatccacggcctctgct
gccctagaactgagcaaccgactggtgcaggccatccaggccacagccgagacggtctat
gacatcctgtctcctgcagcgcccatctcccgctccctgcaggacaagcgctctgcccaa
aggctgcgtagaggccagcagccagctgacctccgggagggcgtggccaaggcttatgac
acggttcgagagggcatcctggatacagctcagaccatctgtgatgtggcatcaaggggc
cacgagcagaaggggctgacaggcgctgtggggggcgtgatccgccagctgcccccaacg
gtggtgaaaccaatcatcgttgccacagaggccacctccaacgtgctcgggggcatgcgt
aaccagatcctgcctgatgcccacaaggaccatgctctcaagtggcgttctgaggaggcc
caggactga
DBGET
integrated database retrieval system
