Castor canadensis (American beaver): 109687244
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Entry
109687244 CDS
T04791
Symbol
Pkd1l1
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccan03037
]
109687244 (Pkd1l1)
04040 Ion channels [BR:
ccan04040
]
109687244 (Pkd1l1)
Cilium and associated proteins [BR:
ccan03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109687244 (Pkd1l1)
Ion channels [BR:
ccan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109687244 (Pkd1l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
Motif
Other DBs
NCBI-GeneID:
109687244
NCBI-ProteinID:
XP_020020666
LinkDB
All DBs
Position
Unknown
AA seq
2514 aa
AA seq
DB search
MVMVLPTPGISSTDGGVGRSWSADYGIQDQLAQGMVEMKAKGMSSDQESNLGLLPGASRF
PSIPTPWSAPERPCCLSEYPPRATPAQGPDKTGSPAICCFPKSDTPALAFHVHVDSGAIL
CLLVDFGDGSGGEMRLCNMTETTAMTAYHQYKKEGVYKLQAVICGFHGAEVELGPYYVEI
GHETVSVLLNSSSVHKDEVIVFAGSNLRQKSTVVMHHFPSISSYNVSFISMSQVGDSQTW
PSVTVWYKMQSVSVYTNGTVFAANTDITFVAVTKETTTLEFVWHFENHPPVRTTSRSVRR
RLSIPQWYRVTVKASNGISSVVSEPHLIRVQKRIVTNRLVSPASALVNTSVAFECRINFG
TDVTYRWDFGDSTISLGGSFASHVYSREGEFTVEVYTFNSVSSAVLRKHVFIVHKPCQPP
PVKNMGLAKVQIWRSQPLRLGVTFEAAVLCDISQGLSYTWRILDSKGSLVTLPAAINTHR
QTLVLPSFALEYGNYTAIAKVHIQGSVVHSSYRVGVEVRAKVPVSIISEGTHLFIPRATS
LPFVLKGSQSYDPDNPGAALRYLWTCTVASSPGWPCFDDSTPYQLDAGAPIVSFPAKWLS
ECCDQFLVTLKVSSGGRNSSEAQVVLSTRSDSSFRLVHISWINFKDIRVNWNEELSLLST
CEGCGETPGLSYSWELFLVNATEKHRIEAFSVTESMVGDHHIPAASGTVFSGEPSEDGTP
GPELGFLDSPRTSPSEGTWPRPSSFPTLDDFEAFYSDIQEALPSRGRQPGSSSSLPGSEP
SMSAEESPHDGDNLLGPFLTPSRSAPTLMTDWPKAQINPTVFQGYTSSGITGPAVTIKPY
SLSSGETYVLQASVASRHGLLGKAQLYLTVNRAPQDVTCQVQPHHGLEAHTIFSVFCMSG
QPDFHYEFSYQIGNASKRTLYHGRDTHYYFALPAGEPVDNYRVMVSTEITDGEGSKAQPC
AVAVTVMPRYHGDDCSGEDLYNSSLKNLSTLQLMGSHTEIRNYVAMITRILRRLAKENRS
ASCGQWTQIQDALISSVCNFILVDQEELIDSVLMLRDLISFPNKLSFISAVHILKYTQTL
LAQGQFSGRLEGGNELSLELVLLITGVWEASRQEKLRNEDYLQEEGMKVISGVLLDRLSL
SHDCQIYMSTGQIEFRTLLHHKIQSSVQSLGSVLVHLPGDLTRHSPVGEETQNLCHISQL
VFFKRSPYPTGRIPGQVGGLVRLTLYSCSSRRPIRRGRLETPVTVEFGEEDSPDNKRNMM
MTFVLLRNKVNSHQFLGLSENPQESLQIQIEFSNVTRRAFPVMLLVRFSEKPSPSEFLVK
QIYFWDEQIVQIYIPAIPRQGANIGYLSLLDADYDRRPPNKYFAKSVNYTVHFRWLRCLF
WDKREWRSENLSPQSGTSPGKVNCSYHRLAPFSILRRKLNATFEVSDISKLQSHPQNLLP
SVFIVLFMILYGFLVIKARCVDCHEKKKTGHIFLQKDTPPYHQLYAIVIDTGFRSPAHFT
SKAFIILCGKNGLTETRELCCPEKPLFERNSRHTFILSASDQLGPLQKICLWHDSRGCSP
SWFVSHVMVKELHSGQGWFFPAQCWLDASRCDGRVERELTCLRQGLGFRKLFYSKFTEYL
EDFHIWLSVYSRPSSSGYLHTPRLAVSFFLLCVYACLTALVTSGGHEQSLPDVGSTEVTF
RSFFLGLLCSILVSPGAQLLSLLFRLSKGATGCPQTMPGQPLRRPCVEAPHGNVYQNQKL
HPVADPLGLPASSILSGSDIAWREAASGSSAACPTFDLEACRAGHHETAMNEKSHHGSLH
PQAPSSGFEGLMYRWSRACLPWLSSVSWFICGSASLACGVGTGFLGYRFVSVQCMQWLYL
LFLSVVCCVFITQPLMICCMALGFAWKRKDDDQFFTESLRAATRSLDLDLEEGYGAHIPL
SPSCCMPECAEEAEKVLAARQRQRQQRWARPPSMSQLRVTRERLRRKSRTQTAVRDISMC
VFMPLLLLFIIHGTFSPDEYSLNQAIRREFIRNGRHSLGSLRSTDDWWDWSMTTLLDGLH
SRGPSAAGGPGAQPGALGGKCYLIGASVMKQTKVSPSRTHKPSRTFLALIEDSVPKWSPE
VGVIEDRNVTPSGPRACRARKEGCVHSLGKTRAEAYEAFTALRASRWIDSSTKVVSVHFT
LFNPPAQLFSSVTLNTEVLPTGGLVPSFLVESFSIFTSDSTPHYHLLLAKLVFLVLNLTH
LCFQLSRMVEKGILSYWRSPRTWLELSVVGVALAYYTASGYLATLAGDVADQFRQGLGLV
FVDLSVMALWNQRARWLRGLLSFLWMLKCVHVLCLLNKMAPCSSVTRLFLSRGFVPALMG
VLLLAAHSHLLQFLLFTWALPPGTSTESFPWRFHFLGRSQKDSIYSLSKSDQQVMACYCM
VFLLLMTTLSFRMLSASLVTFFRKRKSVQSKSLVTLKDVAAYVWGKVLTLAGLDSANLEE
AEVAVDHNYYLDEFSSLLDELLIKINGLYDSLELPILEKQSRRTVAARAEGSPS
NT seq
7545 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggtgctgcccactccaggaatcagctcaacggatgggggtgttggaagaagc
tggtctgctgactatggtatccaggaccagctggcacaaggcatggttgagatgaaggcc
aagggcatgtccagtgaccaggaaagcaacttgggccttctgcctggagcttcccgcttt
cccagcatccccacaccctggtctgctcctgagaggccctgttgcctcagtgagtatcct
cctagggctacccccgcacaaggtcctgataagactgggagcccagccatctgttgcttc
cctaaatcggacactccagctcttgcattccatgttcacgtggattcgggagcaattctt
tgtctgctggtggattttggggacggttctggaggtgaaatgaggctttgcaacatgaca
gagacaacggccatgactgcctaccaccagtacaaaaaagaaggtgtctacaagctccag
gctgttatttgtgggtttcatggagcggaagtggaacttggaccttattatgtggaaatt
ggccacgagactgtgtctgtgctcttgaattccagcagtgtccacaaggatgaagttatt
gtgttcgctggctccaacctaaggcagaaaagtactgttgtaatgcatcattttccatcc
atctcttcatacaatgtgtcctttatttctatgtcccaagtgggtgacagtcagacttgg
cccagcgtgactgtttggtataagatgcaatctgtctctgtctacacaaacggaaccgtg
tttgctgcaaacacagacatcacctttgtggctgtgaccaaggagaccacaaccctggag
tttgtgtggcattttgagaaccatccgccagtgaggacaacttctagaagtgtcagaagg
agactcagcatcccccagtggtaccgtgtaacagtcaaggcctctaatgggatcagcagt
gtggtctctgagccccacctcatcagggtgcagaagagaattgtgaccaaccggctcgtg
tcccccgcctcagccctggtaaacaccagtgtggcctttgagtgtagaatcaactttggc
acagatgtcacctatcggtgggactttggggatagtaccatcagcctagggggcagcttc
gccagccatgtctacagcagggagggagaatttacagtggaggtctataccttcaacagt
gtcagctccgctgtcctaaggaagcacgtcttcattgtgcacaagccctgccagccaccc
ccagtgaagaacatggggcttgcaaaggtgcagatatggcggtctcaacccctgagacta
ggagtgacatttgaagctgctgtcctctgtgacatttcccaaggtctttcttatacctgg
agaattttggactccaaggggtcccttgtcaccctccctgctgccatcaacacccacaga
cagaccctcgtgctcccaagctttgcactggagtatgggaactacactgccattgccaag
gttcacatccagggcagcgtggtacacagcagctatcgcgtgggtgtggaggtacgagcc
aaggtacctgtcagcataatctcagagggcacacacctcttcatccccagggccacctcg
ctccccttcgttctcaaagggtcccaatcctacgaccctgacaatccaggggctgctctc
aggtatctctggacatgcactgttgccagctcacctgggtggccctgctttgacgactcc
actccctaccaactggatgctggggctcccattgtttccttcccagcaaaatggctcagt
gaatgctgtgaccagttcctcgtgacgctgaaggtctccagtggtggccgaaactcttca
gaggcccaggtggtcctgtccacccgctctgactcatccttcaggttggtccacatctcc
tggatcaactttaaagacatccgtgtcaactggaatgaagaactttctctcctatctacg
tgtgaaggctgtggagaaaccccgggtctctcttactcctgggagcttttcttagtcaac
gcaacagaaaagcataggatagaagccttttcagtcacggaatccatggtgggtgaccac
cacattcctgctgccagtggcactgtgttctcaggggagccttctgaagatgggacacca
ggcccagagctagggttcctggactctccaaggacaagtccctctgagggaacctggccc
cgacccagctccttccctaccctggatgattttgaagccttttacagtgacatccaagaa
gcactgccatctagaggaagacagccaggaagcagcagcagcctcccaggatcagagccg
agcatgagtgctgaggagagcccccatgacggagataacctgctgggtcctttcctcact
ccaagcagatcagcaccaactctcatgaccgactggcccaaggcccagatcaacccaact
gttttccaaggttacacatcatcgggtatcacaggaccagctgtgacaataaagccgtac
tcactgagcagtggagagacatatgtcctacaagcgtctgtggcttcaaggcatggctta
ctaggcaaagcgcagctctacctgactgtcaaccgagctccccaggatgtgacttgtcag
gtgcagcctcaccatggcctcgaggcacacaccatcttcagtgtcttctgcatgtcaggg
caaccggattttcattatgaatttagttaccagataggaaacgcctccaaacgcaccctg
tatcacgggagagatacccactactattttgcattgccagctggtgagcctgtggataat
tacagagtcatggtttctacggagatcacagatggagaaggctccaaggcacagccgtgt
gctgtagcagtgactgtgatgcctcgttaccatggggatgactgctccggtgaggacctg
tataattccagcctgaaaaacctgtctaccctccagctgatggggagtcacacagaaatc
aggaactatgtagctatgatcactaggatcctgaggcgtttggctaaggagaacagaagt
gcttcatgtggccaatggacacaaatacaggatgcactcatttcttcagtgtgcaacttc
attcttgtagatcaggaggagctgattgattctgttcttatgttaagggacctcataagc
ttccctaataagttaagttttattagtgcagtgcacatactcaaatacacccagacgctc
cttgctcaaggccagttctcagggaggcttgagggtggcaatgaactcagtcttgaactt
gtccttctcatcacgggagtctgggaagcctccagacaagaaaaattgagaaatgaggac
tacctacaagaagaaggaatgaaggtcatctcaggtgtgctgctagaccggctgtctttg
agccatgattgtcagatctacatgagcacagggcagattgagttccggacccttctacac
cacaaaattcagagctcagtccagagcctgggctccgtcctggtgcatttacctggtgac
ctgactaggcacagtcctgttggagaggaaacgcagaacctgtgtcacattagccagctg
gtgttcttcaagaggagcccttatcccacaggacggatacctgggcaggttggtggcctt
gtgcgcctcaccctctacagctgctccagcagaagacccatccgcagaggacgactggag
actccagtgactgtggagtttggagaagaagacagccctgataataagagaaatatgatg
atgacgtttgtcttgcttcgtaataaggtgaattctcatcagttccttgggctttctgaa
aacccccaggaatcactgcagatacaaattgaattttccaatgtcacaagaagagcattt
ccggtcatgttgctagtgagattctctgagaaacccagtccatctgagtttcttgtgaaa
caaatctatttctgggatgagcagattgttcaaatctacataccagctattccacgccaa
ggagcgaacataggatatttgtccctattggatgctgactatgacagaagacctccaaac
aaatatttcgccaagtcagtgaactatacagtacatttccggtggctccgatgcctgttc
tgggataagagagagtggagatctgaaaatctctctccacaatcaggaacttctccagga
aaagttaactgcagctatcatcgcctggcaccattctccatcctcagacgaaagctgaat
gccacttttgaagtgagtgatatttccaagctacagagccacccacaaaacctgcttccc
agtgtttttattgtgctttttatgattctttatggattcttggttataaaagccagatgt
gtagattgtcatgaaaaaaagaaaactggccacatttttctgcaaaaagacacgccacct
taccaccaactatatgccattgtcatagacactggtttccggtcgccagcccattttacc
tcaaaggctttcatcattttatgtggcaaaaatgggcttacagaaaccagagaactctgc
tgtccagagaagcccctgtttgaaaggaattccaggcacacctttatcctcagtgcttct
gaccagctgggcccgctccagaagatttgcctctggcatgacagccgtgggtgttccccg
agctggtttgtcagccatgtgatggtgaaggagctacactcaggacagggctggttcttc
cctgcccagtgctggctggatgccagccgatgcgatggccgtgtggagcgggagcttacc
tgtctgcgccaagggcttggcttcaggaagcttttctattcaaagttcaccgagtacctg
gaggatttccacatctggctctcggtatacagccggccctcttccagtggctacctgcat
accccacggcttgccgtgtccttcttcctgctgtgtgtctatgcatgcctcactgccctg
gtcacttcaggaggacatgaacagtctcttccagatgttggctccactgaggtcactttc
agatccttcttcctgggtctcctgtgctctatcctggtttctccaggggcacagctcttg
tccctgctcttcaggctcagcaagggagccacagggtgtccccagactatgccaggccag
cctctacgaagaccatgcgtggaagcacctcatggtaatgtgtaccaaaatcagaaactc
caccctgtggctgatcctttggggcttcctgcatcatccattctctctggaagtgacatt
gcctggagggaggcagcaagtggcagcagtgcagcctgtccaacctttgatctggaggcc
tgcagggctggccaccatgagactgctatgaatgagaagagccaccatggatctctgcat
ccacaagctcccagcagtggttttgagggactgatgtaccggtggtcaagagcctgtctt
ccttggctgagctctgtaagctggttcatctgtgggtcagcttcgttggcctgtggtgta
gggacaggattccttggctacaggtttgtctcagtgcagtgtatgcaatggctgtacctg
ctgttcctctccgtggtctgctgtgtgtttatcacccagccacttatgatctgctgcatg
gccttgggcttcgcttggaaaagaaaagacgatgatcaatttttcactgagtctttacgt
gcagcaactaggagtctggacttggacttggaagaaggctatggagctcacattcccctc
tctcccagttgctgcatgcctgagtgtgcagaggaggctgaaaaggtcttggctgcccga
caacgacagcgccagcagcgctgggcccggccaccatccatgtcacagctaagggtcacc
agagagaggctgaggagaaagagccgcacgcagacagccgtgagagacatttccatgtgt
gtcttcatgccgcttctgctcttgtttataatacatgggacattttccccagatgagtac
tctctcaatcaagccatccggagggaatttatcagaaatggcagacactccttggggagc
ctgagaagcaccgatgactggtgggactggagtatgaccacactgctggacgggctgcac
tccagaggcccctctgctgctggggggccgggggctcagcctggagccctcgggggaaaa
tgctacctaattggtgcttcagtaatgaagcagaccaaagtttctcccagcagaacacac
aagccttccaggacattcttggcactcattgaagactctgttcctaaatggagccctgaa
gttggagtcattgaggacagaaatgtgacccccagtggtcccagggcctgcagggcaaga
aaggagggctgtgtacatagcctgggcaaaacaagagcggaagcctatgaggccttcacc
gccctcagggccagcaggtggatcgacagcagcaccaaggtggtgtctgtgcactttacc
ctcttcaaccctccagcccaactcttctcgagtgtgaccctgaacacagaggttctcccc
acaggaggcctggtcccatccttcctagtggagtcattcagcatcttcactagtgattcc
accccgcattaccacctcctgcttgccaagctggtcttcctggtgctcaacctgacccac
ctctgttttcaactcagcagaatggttgaaaaaggcatcctcagctactggcgaagccca
agaacctggctggagctctcagtggttggagtggcccttgcctactacacagcctctggc
tacctcgctacccttgctggggatgtcgctgatcagttccgccaaggacttggtctggtg
tttgtggacctcagtgtgatggcactgtggaatcagagggcgaggtggctccggggactc
ctctccttcctttggatgctgaaatgtgttcatgttctttgccttctaaacaaaatggca
ccctgctcttctgtgacacgtctctttctctccagaggctttgtaccagcgctcatgggg
gttctgcttctggctgcccactctcacctgctccagtttctgctgttcacctgggcactg
ccacctggcacctccacagagtccttcccctggcggtttcattttctgggaagaagccaa
aaagactcaatctacagcctctccaagtctgaccagcaagtgatggcttgttactgcatg
gtcttccttctgctgatgaccacattgtctttcaggatgctgagtgcctctctcgtgact
tttttccgaaaaagaaaatccgttcagagtaaatctcttgtaacacttaaagatgtcgct
gcttatgtgtgggggaaagtcctcaccttagcggggctggactcagcgaacttggaagag
gctgaggtggctgtggaccataattactacctcgatgaattctccagcctgttagatgaa
cttctgataaagatcaatggtttgtatgacagcctagagctacccattctagaaaagcaa
tccaggaggacggtggcagcaagggcagaagggagcccttcttag
DBGET
integrated database retrieval system
