Castor canadensis (American beaver): 109687309 Help Entry 109687309         CDS       T04791                                  Symbol Ddb1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism ccan  Castor canadensis (American beaver) Pathway ccan03420   Nucleotide excision repair ccan04120   Ubiquitin mediated proteolysis ccan05161   Hepatitis B ccan05170   Human immunodeficiency virus 1 infection ccan05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:ccan00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     109687309 (Ddb1)   09124 Replication and repair    03420 Nucleotide excision repair     109687309 (Ddb1)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     109687309 (Ddb1)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     109687309 (Ddb1)    05161 Hepatitis B     109687309 (Ddb1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ccan04121]     109687309 (Ddb1)    03400 DNA repair and recombination proteins [BR:ccan03400]     109687309 (Ddb1) Ubiquitin system [BR:ccan04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      109687309 (Ddb1) DNA repair and recombination proteins [BR:ccan03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       109687309 (Ddb1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       109687309 (Ddb1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  109687309 NCBI-ProteinID:  XP_020020764 UniProt:  A0A250Y6X8 LinkDB All DBs Position Unknown AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRE TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgtgtgact ggacactttacttcagcagaagacttgaacctgttgattgccaaaaacacaagattagag atctatgtggtcactgcggaggggcttcggccagtcaaagaggtgggcatgtacgggaag attgctgtcatggagcttttcaggcccaagggggagagcaaggacttgctgtttatcttg acagctaaatacaatgcctgcatcctggagtataagcagagtggcgagagcattgatatc attacacgagcccatggcaacgtccaggaccgcattggccgcccctcagagactggcatc attggcatcatcgaccccgagtgccgcatgattggcctgcggctctatgatggccttttc aaggttattcctctagaccgcgacaacaaagagctcaaggcctttaacatccgcctggag gagctgcatgtcatcgatgtcaaattcctgtacggttgtcaagcacctaccatttgtttt gtctaccaggaccctcaggggcggcatgtaaaaacctatgaggtatctctccgagagaaa gaattcaataagggcccatggaaacaggaaaatgtagaagctgaagcatccatggtgatt gcagtcccagagccctttggaggggccatcattattgggcaggaatcgatcacctatcac aatggtgataaatacttggcaattgcccctcctatcatcaagcaaagcacaattgtgtgc cacaatcgggtggaccctaacggttcacgataccttctgggagacatggaaggacggctc ttcatgctgcttttggagaaggaggaacaaatggatggcactgtcaccctcaaggatctc cgtgtggaactcttgggagagacctcaattgccgagtgcctgacgtaccttgataatggt gttgtgtttgttgggtctcgcctaggtgactcccagcttgtgaagctcaacgttgacagc aatgaacaaggctcctatgtagtggccatggaaacatttaccaatttaggacccattgtg gatatgtgtgtagtggacctggagaggcaggggcaggggcagctggtcacttgctctggg gctttcaaggaaggttccttgaggatcatccggaatggaattggaatccatgagcatgcc agcattgacttaccaggcatcaaaggcttatggccgctgcggtctgaccccagccgtgag actgatgacactttggtgctttcttttgtgggacagacaagagttctcatgctaaatgga gaggaagtggaagaaactgaactgatggggtttgtggatgatcagcagacattcttctgt ggcaatgtggctcatcagcaacttatacagatcacgtcagcatctgtgaggttggtctct caagagcccaaagccctcgtcagtgagtggaaggagcctcaaggcaaaaacatcagtgtg gcctcctgcaacagcagccaggtagttgtcgctgtgggaagggccctttattacctgcag atccatccgcaggagctccggcagatcagccacacagagatggaacatgaagtggcctgc ttggacatcacaccactgggggacagcaatgggctgtctccactttgtgccattggcctc tggacagacatctcagcccgtatcttaaagctgccatcttttgaactactgcacaaggag atgctcggtggagagattattcctcgctccatcctgatgaccacttttgagagtagccac tacctcctttgtgcgttgggagatggagcccttttctactttgggctcaacattgaaaca ggtttgttgagtgaccgtaagaaggtgactctgggcacccaacccacagtattgaggact ttccgttctctttctaccaccaatgtctttgcttgctctgaccgccccactgtcatctac agcagcaaccacaagttggtcttctccaatgttaatctcaaggaggtgaactatatgtgt cccctcaactcagatggctatcctgacagcctggcactggcaaacaacagtaccctcacc attggcaccattgatgagatccagaaactgcacattcgcacggttcccctctatgaatct cccaggaagatttgttatcaggaagtgtcccagtgctttggggttctctccagccgcatt gaagtccaagacacaagtggaggtacaactgctctgagacccagtgccagcacccaggcc ctgtctagcagcgtcagctccagcaagctgttctccagcagcactgctccccacgagacc tccttcggtgaagaggtggaagtgcacaacctcctcatcatcgatcagcacaccttcgaa gtgcttcatgcccatcagtttctacagaatgagtatgccctcagcctggtctcctgcaag ttgggcaaagaccccaatacatacttcattgtgggtacagctatggtatatcccgaagag gcagagcccaagcagggtcgcatcgtggtcttccagtattcggatggaaaactacagact gtggctgaaaaggaagtgaagggggctgtgtactctatggtggaatttaatgggaagctg cttgccagcatcaacagcacggtgcggctctatgagtggaccacagaaaaggagctccgt accgagtgcaatcactacaacaacatcatggccctctacttgaagactaagggtgacttc atcctggtgggcgatcttatgcgctcagtgttgctacttgcctacaagcccatggaggga aactttgaagagattgcccgagacttcaatcccaactggatgagtgcagtggaaatcttg gatgatgacaatttcttgggagctgaaaatgcctttaacttgtttgtgtgtcagaaggac agcgctgccaccactgacgaagagcggcagcacttgcaggaggttggtctcttccacctg ggcgagtttgtcaatgtcttctgccatggctctctggttatgcagaatttgggcgagact tccacccccactcagggctccgtgctctttggcacagtcaatggcatgattgggctggtg acctcactatcagagagctggtacaacctcttgttggatatgcagaaccgactcaataaa gtcatcaaaagtgtgggcaaaattgagcactccttctggagatcctttcacactgagcga aagacagagccagccacgggcttcatcgatggagacctcattgagagtttcctggatatc agccgccccaagatgcaggaggtcgtggcaaacctacagtatgacgatggcagcggtatg aagcgagaagccaccgcagatgacctcattaaagttgtggaggagctgacccggatccat tag

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