Castor canadensis (American beaver): 109687467
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Entry
109687467 CDS
T04791
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04136
Autophagy - other
ccan04140
Autophagy - animal
ccan05010
Alzheimer disease
ccan05014
Amyotrophic lateral sclerosis
ccan05016
Huntington disease
ccan05017
Spinocerebellar ataxia
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109687467
04136 Autophagy - other
109687467
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
109687467
05014 Amyotrophic lateral sclerosis
109687467
05016 Huntington disease
109687467
05017 Spinocerebellar ataxia
109687467
05022 Pathways of neurodegeneration - multiple diseases
109687467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109687467
03029 Mitochondrial biogenesis [BR:
ccan03029
]
109687467
Membrane trafficking [BR:
ccan04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109687467
Mitochondrial biogenesis [BR:
ccan03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109687467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_RSE1_2nd
DUF5711
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR35_TULP_N
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
109687467
NCBI-ProteinID:
XP_020020959
UniProt:
A0A250YI68
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MEAEAADAPPGGVEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPANPTGLCALSINHSNSYLAYPGSLTTGEIVLYDGNSLKTVC
TIAAHEGTLAAITFNSSGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTTSRPEEASTWSGYMGKMLMAATNYLPAQVSDMMNQ
DRAFATGRLNFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGDCVLIKTHSLL
GSGTTEENKENDLRPSLPQSYAATVARPSTSAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggccgcggatgcccccccgggaggggtcgaggcggcactcagctgcttc
tctttcaaccaagactgcacatccctagcaattggaaccaaagccggttacaagctgttt
tctttgagttctgtggagcaactggaccaagtccatggaagcaatgaaatccctgatgtg
tacatcgtggagcgcctcttctccagcagcctggtggtggtggtcagccacaccaaacca
cggcagatgaatgtatatcacttcaagaaaggcacagagatctgtaattatagctactcc
agcaacatcttgtccataaggctgaacaggcagaggctgctggtctgcctggaggagtcc
atttatatccacaacattaaagatatgaagctgttgaagaccctcttggatattcctgca
aacccaacaggtctgtgtgccctctctatcaaccattccaattcttacctggcctatcct
gggagcctgactacaggtgaaattgtgctttatgatggaaactccctgaaaactgtctgc
accatcgctgctcatgaggggacactagccgccatcaccttcaactcctcaggctccaaa
ctagcaagcgcatctgaaaaaggcacggtcatccgggtgttctctgtacctgatgggcaa
aagctctatgagtttcggagaggaatgaaaaggtatgtgacaatcagctctctagttttc
agtatggactcacagttcctgtgtgcctccagcaacacggagaccgtgcacattttcaag
ctggaacacctcaccaccagccgtccagaagaggcttccacctggagtggctacatggga
aagatgctcatggctgctaccaactacctccccgcccaggtgtcagacatgatgaaccag
gacagggcctttgccaccggacgcttgaacttctctgggcagaagaacatctgcaccctc
tccacgatccagaaattgccaaggctgctagttgcatcctctgatggacatctttacatc
tataatttggaccctcaggatggaggagactgtgtcttaatcaaaacccacagcttgctt
ggctcaggaacaacagaagagaacaaagaaaacgacctcagaccttccttacctcagtct
tatgcagcaactgtagccagaccgagcacatctgcagcctccaccgtgccaggttattct
gaggacggtggcgcactccgaggagaagtgattcctgaacacgagtttgcaacgggacca
gtgtgtcttgatgatgagaatgaatttccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcatga
DBGET
integrated database retrieval system
