Castor canadensis (American beaver): 109687708
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Entry
109687708 CDS
T04791
Symbol
Paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109687708 (Paxbp1)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109687708 (Paxbp1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
109687708
NCBI-ProteinID:
XP_020021290
UniProt:
A0A250Y5U6
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Position
Unknown
AA seq
917 aa
AA seq
DB search
MFRKARRVNVRKRNDSEEEERERDEEQEPPPLLPPPATGEEPGPGGGDRAPGGESLLGPG
LPPPSALTPGLGAEAGGGFPSGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENEEVF
KVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSADNDQPVDKSGHVKDTNQEDGVIIS
EHGEDEMDMESEKEEEKPKTAGAFSNALSSLNVLRPGEIPDAAFIHAARKKRQMARELGD
FTPHDNEPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSDDDAL
VTGEQDEELSRWEQEQIRKGINIPQVQASQPSEVNMYYQSTYQTMPYGSSYDIPYSYTTY
GSSDAKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSR
VDSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRA
SRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRR
QAREQTGKMADHLEGLSSDDEETSTDITNFNLEKDRISKESSKVFEDVLESFYSIDCIKS
QFEAWRSKYYMSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYG
CEEREQEKDDVDVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPS
VVNAENKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLL
GNFLQWYGIFSNKTLQELSIDGLLNRYILMAFQNSEYGDDSIKKAQNVINCFPKQWFMNL
KGERTISQLENFCRYLVHLADTIYRNSIGCSDVEKRNARENIKQIVKLLASVRALDHAMS
VASDHNVKEFKSLIEGK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaaaggcccggcgggtgaacgtgcgcaagaggaacgactccgaggaggaggaa
cgggagcgcgatgaagagcaggaaccgccgccgttgctgccaccgccggccactggcgaa
gagccgggtcctggaggcggcgacagggcccccgggggggagtcgctgctgggcccggga
ctgccgccgccctccgcgctgaccccgggcctcggggctgaggccgggggtggcttcccc
agtggcgcggagcctggcaacggactgaaaccgcgcaagaggcctcgcgagaacaaagag
gtgccccgggccagcttgctcagcttccaggacgaggaggaagaaaacgaagaagttttc
aaagtgaagaaatcaagttacagcaaaaagatagtaaaattgctcaagaaagaatataaa
gaagatcttgaaaaatcaaagattaagacagaactcaactcatcagccgataatgaccag
cctgtggacaaatcaggacatgttaaggacacaaatcaagaagatggagtcatcatcagt
gaacatggtgaagatgaaatggacatggagagtgagaaggaggaagaaaagccaaagact
gctggggcattctccaatgctttgtcgtctttgaatgttctccgtccaggagagattcca
gatgcagcttttatacatgctgcaaggaagaagcgtcagatggcccgggaattaggagat
ttcactcctcatgataatgagcctggtaagggccgcctcgttagagaggatgagaatgat
gccagcgatgatgaagatgatgatgagaaacgccgtatagttttttctgtgaaagaaaaa
tcacaaagacaaaaaatcgccgaggaaatagggattgaggggagtgatgatgatgcttta
gtaactggagaacaagatgaagagctgagccgatgggaacaggagcagataagaaaagga
attaatatccctcaggttcaagcaagtcagcccagtgaagtgaatatgtactaccagagc
acttaccagacaatgccttatggttcatcctatgacataccttacagttacacgacctat
ggatcatcagatgccaaatctcaaaaaacagataatacagtccctttcaaaactcccagt
aatgagatgactcccgttactattgatttggtaaagaaacagcttaaagacaggttggac
tccatgaaagaattgcacaaaacaaatcgacagcagcacgagaaacatcttcaaagtcga
gtggactctaccagggctattgagagattagaagggtcttctgggggtattggtgaacgg
tataaatttttgcaagaaatgcgagggtatgtccaagacttgcttgagtgtttcagtgaa
aaggtgccactgattaatgaacttgaatcagcaatacatcagctgtacaaacagcgagct
tcccgccttgtccaaagacgacaagatgatattaaagatgaatcttcggagttttcaagc
cattcaaataaagctttgatggcaccaaatcttgattcctttgggcgagatcgggcactg
tatcaagagcatgcaaaacgtcggattgcagagcgggaggctaggaggactcgtcgtaga
caagccagagagcaaactggtaagatggcagatcaccttgaaggcctttccagtgatgat
gaagaaacatctacagatattactaattttaatctggaaaaagatcgtatttcaaaagag
tccagcaaagtttttgaagatgtccttgaaagtttctattcaattgattgtattaaatcc
caatttgaagcatggcgttcaaaatactacatgtcctacaaggatgcttacatcggcctt
tgcttgccaaagttgttcaaccccctcatcagactgcagctcctcacttggactcctctt
gaggcaaagtgtcgtgactttgagaatatgctgtggtttgaatctttgctattttatggt
tgtgaagaacgagaacaagagaaagatgatgtagatgttgccctactacctaccattgtg
gagaaggtgattcttcctaaactaacagtgatagctgaaaatatgtgggaccctttttcc
acaacacagacttcaagaatggttggaattacactaaaattaattaatggatatccttca
gtagtaaatgcagaaaataaaaatacacaggtatacttaaaggcacttttattgagaatg
agaagaactttagatgatgatgtattcatgccattgtatcctaaaaatgtcttagaaaat
aaaaattctggaccttacttgttttttcaacgacagttttggtcttccgttaagctatta
ggaaactttcttcagtggtatggtattttctcaaataaaactcttcaggagttatcaata
gatggtttattaaatagatacattctcatggcctttcagaattcagaatacggagatgat
agcatcaaaaaggcccaaaatgtaatcaattgtttccctaaacagtggttcatgaatctg
aaaggagaaagaactatttctcagttagaaaacttttgccgataccttgtacatttagca
gatacaatttacaggaatagtattgggtgctctgatgtggaaaaaagaaatgcaagggaa
aacataaaacagattgtaaaacttctagcaagtgttcgagccttggatcatgctatgtct
gttgcaagtgaccataatgtaaaagaatttaagtctttgattgaaggaaaatag
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