Castor canadensis (American beaver): 109687891
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Entry
109687891 CDS
T04791
Symbol
Rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109687891 (Rc3h2)
04121 Ubiquitin system [BR:
ccan04121
]
109687891 (Rc3h2)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
109687891 (Rc3h2)
Ubiquitin system [BR:
ccan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109687891 (Rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
109687891
NCBI-ProteinID:
XP_020021587
UniProt:
A0A250YM29
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETSGKIPSSNGISNVENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNATGPSAES
VTENKIGSPPKTPVSNIAATSAGPSNVGTELNSGPPKSSPFLTRVPVYPQHSENIQYFQD
PRTQIPFEVPQYPQAGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYSTF
SPRDRMNSSPYQPPPPQQYGPVPPVPSGMYAPVYDSRRIWRPAMYQRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPDQ
WAQYHTQKAPVSSTLPVATQSPTPPSPLFSVDFRTDFSESMSGTKFEEDHLSHYSPWSCG
TIGSCINAIDSEPKDVIANSNAVLMDLDSEDVKRRVHLFETQRRTKEEDPIIPFSDGPII
SKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATSAH
YIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEGRH
LTLNLLSKEMELRNGESDYTEDAADTKPDRDIELELSALDTDEPDGQSEQIEEILDIQLG
ISSQNDQLLNGTAVENGHPVQQHQKESLKQKRQSLGEDHVILEEQKTILPVTSCFSQPLP
VSISNASCLPITTSVSVGNLMLKTHVMSEDKSDFLKPVANGKMVNS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgctatcaacacagac
attgatgtacttccagttaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaaattaagtaatttaggtgagaataaacactatgaagttgcaaagaaa
tgtgttgaggatttggcactctacttaaaacctctaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagtcgtccaatgcaaaggaaactagtgacacttgtaaactgt
caactggtggaggaagaaggtcgtgtcagagccatgcgagcagcccgttcacttggagaa
agaactgtaacagaactgatattacagcaccagaaccctcagcaattgtctgccaatcta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttaaagttggtgttgctggcattagaagatggttctgccctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaagacaagtattggt
catgttgtacaactactgtatcgagcttcttgtttcaaggttaccaaaagggatgaagac
tcttccctgatgcaactaaaggaggaatttcggagctatgaggcgctacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggccttcgtatttcacctgagcagtgg
tcctcacttctctatggtgacttggctcataaatcacacatgcagtctattattgataag
cttcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaataggttgcggcctcatttagagcttcttgccaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagccaaacagcaaatacaagactagtatgtgccgagatttgcga
cagcaaggggggtgtccccgaggaacaaattgtacatttgcccattctcaggaagagctt
gaaaagtatcgactaaggaacaaaaagatcaatgcaactgtaagaacgtttcctcttctg
aataaagttggtgtaaacaacactgtcacaaccacagccgggaatgtcatttctgtcata
ggaagtactgaaacatccggaaaaattccaagttcaaatggaatttcaaatgtagaaaac
agtgtttcccagctaatcccacgtagtactgacagtacattaagagctctggaaactgtg
aagaaagtggggaaggttggcactaatggtcagaatgctactgggccctctgcagagtct
gtaactgaaaataaaattggttctccacccaagactcctgtaagtaacatagcagctacc
tcagctgggccctctaatgttggaacagagctgaattctggacctccaaaatccagccca
tttctaactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaagat
ccaaggactcagataccctttgaggtcccacagtacccacaggcaggatactatccacca
cctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaataat
gttccagagtcctccctcccacctgcttccatgccatatgctgatcattacagtacattt
tcccctcgagatcgaatgaattcttctccctaccaacctcctcctccgcagcagtatggg
ccagttcctccagtaccttctggaatgtatgctcccgtgtacgatagcaggcgcatctgg
cgcccagctatgtaccaacgagatgacattattagaagcaattctttacctccaatggat
gtgatgcactcatctgtctatcagacatctttgcgggaaagatataactcattagatgga
tattattcagtggcttgtcagccaccaagtgagcccaggacaactgtgcctttaccaagg
gaaccttgtggtcatttgaagaccagttgtgaggagcagataagaagaaagccagatcag
tgggcacaataccacactcagaaagcacctgtctcttcaacgcttcctgtggcaacacag
tcaccaacaccaccttctcctctattcagtgtagactttcgcacagatttctctgagagt
atgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtcttgtggc
actataggctcctgtataaatgccatcgattcagagcccaaagatgtaattgctaattca
aatgctgtgttaatggacttggacagtgaagatgttaaaagacgagtacatttatttgaa
actcagagaaggacaaaagaagaagacccaataattccctttagtgatggacccatcatc
tcaaaatggggtgcaatttcccgatcttcccgtacaggttaccatactacggatcctgtc
caggcaactgcttcccaaggaagtgcaactaagcctattagcgtatcagattatgtccct
tatgtcaatgctgttgattcaaggtggagttcatatggcaatgaggccacatcagcacac
tatattgaacgagacagattcattgttactgatttatctggtcatagaaagcattccagt
actggagaccttttgagcattgaacttcagcaggccaagagtaactcattacttcttcag
agggaggctaatgctttggctatgcaacagaagtggaattccctggatgaaggccgtcat
cttaccttgaatcttctaagcaaggaaatggaactgagaaatggagagagtgattataca
gaagatgcagcagatactaagcctgatagggatattgaattagaactttcagcacttgat
actgatgaacctgatggacaaagtgaacaaattgaagagatcctggacatacaacttggc
atcagttctcaaaacgatcagttgcttaatggaacagcagtggaaaatgggcatccagtc
cagcagcaccagaaggagtcactgaagcagaagagacagagtttaggtgaagaccatgtg
attctggaggaacaaaaaacaattctgccggtaacttcttgctttagtcagccactccca
gtgtctattagcaatgcaagttgcctccccatcaccacatctgtcagtgttggcaatctc
atgctgaaaactcatgttatgtccgaagataaaagtgactttttaaaacctgttgcaaat
gggaagatggttaacagctga
DBGET
integrated database retrieval system
