Castor canadensis (American beaver): 109687967
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Entry
109687967 CDS
T04791
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccan03009
]
109687967
Ribosome biogenesis [BR:
ccan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109687967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20_C
UTP20
DUF7051
Motif
Other DBs
NCBI-GeneID:
109687967
NCBI-ProteinID:
XP_020021683
UniProt:
A0A8B7UQ34
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MSENVMGIRSYLRQRKMRSEGRREQFSVLDHLLTIIQLPPNKDTTYLSHSWAALVVLPHI
RPLEKEKVTPLVTCFIESLFMAVDRGSFGKGVLFVLCQAVNTLLSLEESSELLHLVPVER
VKNLVLTFPWEPSVLLLADLYYHRLSLCGCKRLLSQEALMELFPKLQANISTGVSKIRLL
TIRILNHFDIWLPESMEGDRLTERQSTFAILRQAELVPATVSDYREKLLHLRKLRHDVVQ
TAVPPGPLQEVPLRYLLGMLYVNFSALWDPVIELISSHAHEMENKQFWKVYYEHLEKAAT
HAEKELQNDTRDEEKSTGDASWEQVQKAGVGALYQEQLALKTDCRERLDHTNFRFLLWRA
LAKFPESVEPRSRELSPLFLRFINNEYYPADLQVAPTQDLRRKSRGMVAEEIEEEPAAEF
DEELEEETVPPDDRPQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLH
QDQMVQKITLDCIMTYKHPHILPYRESLQRLLEDRSFKEEIVHFSISEDNTVVKPAHRAD
LFPILMRILYGRMKNKTGSKTQGKSASGTRMAIVLRFLAGTQPEEIQIFLDLLSEPVKHF
KNGECHSAVIQAMDSLDLSKVLPLGRQHGILNSLEIVLKNISHLISEYLPKILQILLCMT
ATVSHILDQREKVQLRFINPLKNLRRLGIKMITDIFVDWESHQFRTEEIDAVFHGAVWPQ
ICRLGSESQYSPTPLLKLISIWSRNARQHRSGKTKRTLREAPILDVKPSGEETYQVSKKV
HVLTFTVHMLLQGLTSKLQVGDLDPCLDIMIEIFNHELFGALAEEKEVKQILSKVMEARR
SKSYDSYEILGKFVGKDQVTKLILPLKEILQNTTSLKLARKVHETLRRIIAGLIVNPEMM
AESILLLSYGLVSENLPLLTEKEKNPAAPAHDPRLPPQSCLLLPPTPVRGGPKAVVSRKT
NMHIFIESGLRLLHLSLKTSKINSSSEHVLEMLDPFVFVLIDCLRSMDVKVITGALQCLI
WILRFPLPSIEKKAGQLTKHLFLLLKNYARLGAARGQNFHLVVNCFKCVTVVVKKLKSYQ
ITEKQLQVLLAYAEEDIYDTSRQATAFGLLKAILSRKLLVPEIDDVMRKVSQLAISAQSE
PARVQCRQVFLKYILDYPLGEKLRPNLEFILAQLNYEHETGRESTLEMIAYLCDTFPQGL
LHENCGMFFIPLCLMMVNDDSAMCKKMASMAIKSLLSKISLEKKDWLFDMVISWFEAKKR
LNRQLAALICGLFVESEGVDFERRLGTLLPVVEKEIDPENFEDIMEETEEKAADRLLFSF
LTLIGKLMKECNFIQFTKPSDTLNKIWSHVHSHLRHPHNWVWLTAAQIFGLLFASCQPEE
LVRKWNAKKTKKKLSEPIAVQFLTSDLDQKMKSISLASCHQLHSKFLDQSSGEQVIKNLL
FVAKVLYLLEHDSKDKQGEIKASEEQEALKDCVAREALEEHKACVDGEAGSDREEKEEPS
KPATLLWLIQKLSWMAKREAAYSPRIPLKRTCIFKFLGAAAVDLGVDKVKPYLPVIIAPL
FRELNSTYAEQDPLLKNLSQEIIELLKKLVGLESFSLAFASVQKQASEKRARRKKRKALE
FVTNPDIAAKKKLKKHKNKSEAKKRKIAFLRPGYKAKRQKTHSLKDLAIVE
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatgtcatgggtatcagatcctacttaaggcagaggaagatgagatccgag
ggaagaagggaacagttttcagtattggatcatctcttaactataattcagttaccccca
aacaaagatacaacttacctttcacattcttgggcagcccttgtagtgttacctcatatt
aggcctcttgagaaagagaaggtgacaccactagtgacgtgcttcatagagtcactcttc
atggctgttgacagagggagttttggaaaaggagtcttgtttgttctttgccaagctgta
aatactctgctaagtttggaagagtcttctgaacttcttcatttggttcctgtggaacgt
gtaaagaacttagtattaacatttccatgggagccatctgtgttgctgttggctgatctc
tattatcacagattatccctctgtggctgcaaaaggctgctttctcaggaagctttaatg
gaattatttcccaagttacaagcaaacatttcgactggcgtatccaagattcggcttttg
acaataaggatcctaaaccattttgacatttggcttccagaatcgatggagggtgatagg
ctgacagagcggcagtccacctttgctatcctacgccaggcagaacttgttccagcaact
gtgagtgattacagagagaagcttcttcacttgagaaaactgaggcacgatgtggtgcag
accgcagtccctcctgggcccttacaagaggtgccacttcgttatttgttaggcatgtta
tatgtcaatttcagtgctctctgggaccctgttattgaactcataagttctcatgcccat
gaaatggaaaataagcaattttggaaagtctactatgaacatctagaaaaagcagctaca
catgctgagaaagaactgcaaaatgatacacgagatgaggagaagtccacaggggatgca
agttgggagcaggtccagaaagcaggtgttggagctctctatcaggagcagttagcattg
aaaactgactgtcgggaaagattggaccataccaactttcgatttttgctctggcgagct
ctggcaaaattcccagagagtgttgagccacgatccagggagctttctccacttttcttg
agatttatcaacaatgagtactacccagcagatctacaagtagctccaacacaggatctg
cggagaaaaagcagagggatggtggcagaggaaatagaagaggaacctgctgctgagttt
gatgaagaattggaggaagagactgtgcctccagatgaccgtccacagaagaaaaagaca
aggagagctgcagcaaagcagttaattgctcatttgcaagttttctctaaattttcaaac
ccccgggccttatatctggaatccaaattatatgagttgtatcttcagttgttgctacac
caagatcaaatggtacaaaaaataacattggattgcataatgacatacaaacatcctcat
atccttccttacagggaaagcttacaaaggttacttgaggacagaagctttaaagaagaa
atagtgcattttagcatttcagaagataatactgtagtgaaaccagcccaccgagcagat
ttgtttcctattctgatgagaattttgtatgggagaatgaagaataagactgggagtaaa
actcaggggaaatctgcttctggcacacgcatggccattgttctgcgtttcctggctggg
acccaacccgaggagatccagatattcttagacctgttgtctgaacctgtgaaacacttc
aagaatggagagtgccattctgcagttattcaagcaatggacagtttggatctctctaaa
gttcttcctctgggtcgtcagcatggcatcctaaatagcctggaaatagtactgaagaac
attagtcatctgatcagtgaatacttaccaaaaattttgcagatactactctgtatgaca
gcaaccgtatcacacatccttgaccaacgagaaaaggtacagctgaggtttattaacccc
ctgaaaaatttaagacgtcttggaatcaaaatgataactgatatctttgtggattgggaa
tcccatcagtttagaacagaagaaattgatgctgtgtttcatggtgcagtttggcctcag
atctgcaggcttggatctgagagtcaatactcacctactcctctgctgaagctaattagt
atctggagcagaaatgcgagacaacatagaagtggcaagacaaagagaactctaagagaa
gcccctattctggatgtgaaacccagtggagaggaaacttatcaggtttccaagaaggtc
catgtgctgaccttcactgttcacatgctgctgcagggcctcaccagcaagctgcaagtt
ggagatttggacccttgtttagatataatgattgagatctttaaccacgaattgtttggt
gcccttgctgaagagaaggaagtaaagcagatcctctccaaagtcatggaggcacgaaga
agcaagagttatgattcttatgaaatcctgggcaagtttgtaggaaaagatcaggttaca
aaacttattcttccattaaaagagatcctacagaataccacgagtttaaaactggcccgg
aaagttcatgaaaccttacgccgaattatagcaggattaattgtaaatccagaaatgatg
gcagaatccattctattgctcagttatggtttggtcagtgaaaatctaccactgttaaca
gagaaagaaaaaaacccagcagcccctgcacatgatccacgtctaccaccccaaagctgc
cttctgcttcccccaactccagttcgaggtggaccaaaggctgttgtgagcaggaaaacg
aacatgcacatatttattgagtctgggcttaggctgctgcatctgagtctgaagacttct
aagatcaattcttcaagtgaacatgttctggaaatgttggatccttttgtgtttgtcctc
atagactgcctgcgttccatggacgtgaaagtgatcacaggtgctttgcaatgcctgatt
tggattttgaggttccctctgccttccatagaaaaaaaagcaggacagctgacgaaacac
cttttccttttgctgaagaactacgcaagactgggggctgctaggggccagaacttccat
ctggtagtgaattgtttcaagtgtgtgactgtagttgtaaagaaactcaagtcttaccag
ataactgaaaaacagcttcaagttctcctggcatatgctgaggaagacatttatgatact
tcacgacaagccactgcatttggccttctgaaggctattttatcaaggaaattattggtc
ccagaaatagatgatgtcatgcggaaagtatcccagttggcaatttctgcacagagcgaa
cctgccagagtccagtgcagacaggtttttctgaaatacattcttgactatccccttgga
gagaaattgagaccaaacttggaattcatacttgctcaactgaattatgagcatgagact
gggagagagtccaccttggaaatgattgcctatctctgtgacacattcccccagggactg
ctccatgagaactgtggaatgttcttcatccctctttgtctaatgatggtaaatgatgac
tctgccatgtgcaaaaaaatggcatccatggcaatcaaatccttgctcagtaagatcagc
cttgagaaaaaagattggctttttgatatggttatctcctggtttgaagcaaaaaagaga
ttaaatagacaacttgctgccctgatctgtggcttgtttgtggaaagtgaaggagttgat
tttgagagaagacttggaactcttcttcctgtagttgaaaaagaaattgatcctgaaaac
tttgaagatatcatggaggagactgaggagaaggctgcagaccgcctgctgtttagtttt
ctcacactcatcggtaaactcatgaaggaatgtaatttcatccagtttaccaagccttct
gatactttgaataaaatctggagtcacgtgcactctcacctgagacatccacacaactgg
gtgtggctcactgcagcccagatttttgggctgctctttgcctcttgccaaccagaagag
cttgttagaaaatggaatgccaaaaagacaaaaaagaaactctcagagcctatagcagtc
cagttcctaacaagtgaccttgaccaaaagatgaaaagtatctctctagcctcttgccat
caattgcattccaaatttttggatcaatcttcaggcgagcaggttattaagaatttatta
ttcgtagcaaaagtcttatatttactagaacatgattccaaggataagcaaggcgagata
aaagcctctgaagaacaggaagctttaaaagattgtgtggctagagaagcattagaagaa
cacaaagcctgcgtagatggagaggcggggtctgacagagaagaaaaggaagagcccagc
aagccagccacactgctctggctgatccagaagttgtcctggatggcaaaacgggaagct
gcttattcacctagaattcctttaaagaggacatgcatctttaagttcctcggtgctgca
gcagtggatcttggggtggacaaggtcaagccgtacctcccagtgatcatcgctcctctg
tttcgagaactgaacagcacctacgcagagcaagatcctctgctgaagaatctatcccag
gaaatcatagaattacttaaaaagctggttggccttgagagtttctcattagcctttgcc
tctgtacagaagcaggctagtgagaaaagggcacgccggaaaaagaggaaggctctggag
tttgtaactaatcctgatattgctgccaagaaaaagttgaagaagcataaaaataaaagt
gaagcgaagaagagaaagatagcattcctgcgtcccggctataaggccaagagacaaaaa
acccacagcctgaaagatttagcaatagtggagtaa
DBGET
integrated database retrieval system
