Castor canadensis (American beaver): 109688187
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Entry
109688187 CDS
T04791
Symbol
Top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03440
Homologous recombination
ccan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109688187 (Top3a)
03460 Fanconi anemia pathway
109688187 (Top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccan03032
]
109688187 (Top3a)
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109688187 (Top3a)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109688187 (Top3a)
DNA replication proteins [BR:
ccan03032
]
Eukaryotic type
DNA Topoisomerases
109688187 (Top3a)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109688187 (Top3a)
FA (Fanconi anemia) pathway
109688187 (Top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
109688187
NCBI-ProteinID:
XP_020022065
UniProt:
A0A8C0XCG2
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MNVPVARFVFPWLRRSGDRALSRAAMEVALRGVRKVLCVAEKNDAAKGIADLLSNGRMRR
REGLSKFNKIYEFDYHLFGQNVTMVMTSVSGHLLAHDFQMKFRKWQSCNPLVLFEAEIEK
YCPDNFVDIKKTLERETQQCQALVIWTDCDREGENIGFEIIHVCKAVKPGLQVLRARFSE
ITPRAVRMACENLAEPDQKVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGTVEFNWKRHRLFNHTACLVLY
QLCMEDPMATVVEVKSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAERLYTQGYI
SYPRTETNIFPKDLNLMVLVEQQTPDPHWGAFAQSILERGGPTPRNGSKSDQAHPPIHPT
KYTSNLQGDERRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLVILARNYLDV
YPYDHWSDKLLPVYEQGSCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKLVVLRQQVQKYKQVFIEAVAKAKKLDEALSQYFGEGAEMAQQEEIYPPMPDPIRKCPQ
CNKDMVLKTKKSGGFYLSCTGFPECRSAVWLPDSVLEASKDGSVCSVCQPPPVHRLKLKF
KRGSLPPTMPLEFVACIGGCDETLKEILGLRFSQGPPRAIQPSGHLQASQALNRMDSGQH
SHPQPPRSRQTGPSKPVAQTLLPPTANSESNSVTCNCGQEAVLLTVRKEGPNQGRQFYKC
NSGSCNFFLWADGNHPTTGRPPTSAPRPPSSSLGLPPSSCSYLGGFDNPGNGGGGGGGTS
CLCSQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGFFQWVDENIAPGTFVALPWPGGRGK
TQGPEARSKRPRASSSEAGSTAKKSRKCSLCHQPGHTRPFCPQNR
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcccggttgcccgcttcgtgttcccgtggctgcgacgatcgggagaccgtgcc
ttgtcccgggccgccatggaagtggctcttcgaggcgtgcggaaagtcctctgtgtggcg
gagaaaaatgacgcggccaaggggatcgccgacctgctgtccaacggtcgcatgaggcgg
agggaaggactttctaagttcaacaagatctacgaatttgattatcatctatttggccag
aatgttaccatggtaatgacttcagtctctggacatttgctggctcatgatttccagatg
aagtttcgaaagtggcagagctgcaacccccttgtcctctttgaagcagaaatcgaaaaa
tactgcccagacaattttgtagatatcaagaaaactctggaacgagagacacagcaatgc
caggccctggtgatctggactgactgtgacagagaaggcgaaaacatcgggtttgaaatt
atccacgtgtgcaaagctgtgaagcctggtctccaggtgttgagagcccgtttctctgag
atcacaccccgtgctgtcaggatggcctgtgaaaacctagctgaacctgatcagaaagtg
agtgatgctgtggatgtgaggcaggagctggacctaaggattggagctgcatttactagg
ttccagaccctgcgtcttcaaaagatttttcccgaggtgctggcagagcagctcatcagc
tatggcagctgccagttcccaacactggggtttgtggtagagaggttcaaagccattcag
gcttttgtaccagaaatcttccacagaattaaagtaactcatgaccacaaagatggtact
gtagagttcaactggaaaaggcatcgtctctttaatcacacagcttgtcttgtcctctat
cagttgtgtatggaggatcccatggcaactgtggtagaggtcaagtccaagccaaagagc
aagtggaggccacaagctttggacaccgtggagctggagaaactagcttctcgaaaattg
agaataaatgctaaagaaaccatgagaattgctgagaggctctacacccaagggtacatc
agctatccccgaacagaaacaaacattttccccaaagacttaaacctgatggtgttggta
gaacagcagactccagatccacactggggggcctttgcccagagcattctagagaggggt
ggccccaccccacgcaatggaagcaagtctgaccaagctcaccctcccattcaccccact
aaatacaccagtaacttgcagggagatgaacggcgactgtatgagttcatcgttcgccat
tttctggcttgctgctcccaggatgctcaggggcaggaaaccaccgtggaaattgacatt
gctcaggaacgctttgtggctcatggccttgtgattctggcccgaaactatctggatgtg
tatccatatgatcattggagtgacaagctcctccctgtctatgagcaaggctcctgcttt
cagcccagcaccgtagagatggtggatggtgagaccagcccaccccagctgctcactgag
gctgacctcatcgccctcatggagaagcatggcatcggtactgatgccactcacgcagaa
catattgaaaccatcaaggcacggatgtatgtggggctcacctcagacaagcggttcctc
cccgggcacctgggcatgggacttgtggaaggttacgattccatgggctatgagatgtcc
aaacctgacctccgggctgagctggaagctgatctgaaactgatctgtgagggcaagaaa
gacaagcttgtggttctaagacagcaagtgcagaaatataagcaggttttcattgaagca
gtggctaaggcgaagaaattggatgaggccttgtcccagtattttggggaaggggcagag
atggcccaacaagaagagatctacccacccatgccagaccccatccggaagtgcccacaa
tgcaacaaggacatggtcctcaagaccaagaagagtggcgggttctacctcagttgcaca
ggtttcccagaatgtcgatcagctgtatggcttcctgactcggtgttggaggccagcaag
gatgggagtgtgtgttcagtttgtcagccaccccctgtacacaggttgaaattgaagttt
aagcgtggcagccttcccccaaccatgcccctggagtttgttgcttgcatcggtggatgt
gatgaaaccctgaaggagatcttgggtctgagattttcacagggccccccgagagctatt
cagccttctggccacctgcaggctagccaagccctgaacaggatggacagtgggcagcac
agccacccccagcctcctagaagcagacagactggaccctcaaagcctgtggcccagact
ctcctaccacccactgccaatagcgaaagtaactctgtgacctgcaactgtggccaggag
gccgtgctgctcactgtccgcaaggagggccccaaccagggccggcagttctacaagtgc
aacagtggcagctgcaactttttcctgtgggctgatggcaaccatcctacaacaggaaga
ccccccacctctgcaccaaggcctcccagcagctcactgggactccctccaagttcatgc
agctatctgggtggtttcgacaaccctggcaatggtggtggtggtggtggtggcacatcc
tgcctgtgtagccagcctgctgtcacacggactgtgcagaaggacgggcccaacaaaggt
cgccaattccacacatgctctaagccacgagagcaacagtgtggcttctttcagtgggtt
gatgagaatatagccccagggacttttgtggccctaccctggccaggaggcagaggaaaa
acccaagggccagaggccagaagcaaaagacccagggccagttcctcagaggcagggtcc
acagcaaagaagtctcggaaatgcagcctttgccaccagcctggacatactcggcccttc
tgtcctcagaacagatga
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integrated database retrieval system
