Castor canadensis (American beaver): 109688326
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Entry
109688326 CDS
T04791
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03030
DNA replication
ccan03410
Base excision repair
ccan03420
Nucleotide excision repair
ccan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109688326 (Rfc1)
03410 Base excision repair
109688326 (Rfc1)
03420 Nucleotide excision repair
109688326 (Rfc1)
03430 Mismatch repair
109688326 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccan03032
]
109688326 (Rfc1)
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109688326 (Rfc1)
DNA replication proteins [BR:
ccan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109688326 (Rfc1)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109688326 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_5
AAA_22
Rad17
RuvB_N
BRCT_2
AAA_33
AAA_14
AAA_16
AAA_17
AAA_7
AAA_18
AAA_30
nSTAND3
Zeta_toxin
NPHP3_N
RNA_helicase
NTPase_1
AAA_28
Motif
Other DBs
NCBI-GeneID:
109688326
NCBI-ProteinID:
XP_020022225
UniProt:
A0A8B7UV89
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKKMVSSKRKEPSQSTDDSRLND
EAIAKQLQLDEDTELERQLHEDEEFARTLAMLDEEPKTKKVRKDTEERETFSSVQANLSK
AEPHKSPHQVKTEQFSNGRKRFSPSKQTKSESLKEPQQHSKPSAREIGEPSVLKASSKLA
LMQTKEEDSYKETEPMASKRKEKAIESKGEKKTPKKTKSSPAKKESVSPEDSEKKRTNYQ
AYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGN
VSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKSKYEIAVEAEMKKE
KSKLERTPQKNNQGKRKISPTKKESESKKSKLTPKKDSPIKAIKKEANVFRRGMDFIEQV
AEETDGDSKPRNLADDRSESKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWH
KNSPEEKKHAAKFGKFAGKDDGSTFKAALLSGPPGVGKTTTASLVCQELGYSCVELNASD
TRSKSSLKASVAESLSNTSIKSFYPGAAVPSMSMKHALIMDEVDGMAGSEDRGGIQELIA
LIKQTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPA
MNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSQRAKKDIRLGPFDVARKVFAAG
EETAHMSLMDKLDLFFHDYSIAPLFVQENYLHVKPIAAGGDMKKHLMLLSRAADSICDGD
LVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLGKYSSTGKHDRIVQDL
ALHMSLRTCSSKRTVNMDYLSHIRDALVQPLTSQGVEGVQDVVALMDTYYLMKEDFENIM
EISSWGGKPSPFSKLDPKVKAAFTRVYNKETHLAPYSLQVAKMSRPSLGSALDSEYSDEL
QEDDAQADEKDQDAVETDAMIKKKTKSSKPSKPEKDKESKKGKGKSSKK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaatgaagaaaatactaagaccaagaataagcctttatcaccaataaaactt
acaccaacatcagtgcttgattattttggaactggaagtgtccaaagatcagataagaag
atggtgtcaagcaaaagaaaagagccttcacaaagtaccgatgattccagattaaatgat
gaagccattgccaagcagttacaacttgatgaagatacagagctggagaggcagctgcat
gaagatgaagagtttgccaggacattagccatgttggatgaagaaccaaagactaaaaag
gtccgaaaggacactgaagagagagaaactttttcatctgttcaagccaatttaagtaaa
gcagaacctcataaatcccctcatcaagtgaaaacagaacagttttcaaatggaagaaag
cgcttcagtcccagtaagcaaaccaagagtgaaagcttgaaagaacctcagcaacattcc
aagccatcagctcgtgagataggagagccctctgttctaaaggccagttctaaactagca
cttatgcaaacaaaagaggaggactcttacaaggaaacagagcccatggcctcaaaaaga
aaagaaaaagccattgaatcaaaaggagagaaaaaaactcccaagaaaaccaaaagttct
ccagctaaaaaagagtctgtaagtccagaagattctgaaaagaaacgcactaattatcaa
gcttatcgaagctacttaaatagagaaggtcccaaagctctgggctccaaagaaataccc
aagggagctgaaaattgcttggaaggccttatattcgtgatcacaggagtgctggagtcc
attgaaagagatgaagccaagtctttaattgaacgttatgggggaaaagtaacaggaaat
gtcagcaagaaaacaaactaccttgtcatgggtcgagatagtggacagtccaagagtgac
aaggcagcagctttggggacaaaaattattgatgaagatggcctgttgaatctgattcga
acaatgccaggcaagaagtccaagtatgaaatagcagttgaagctgagatgaagaaagaa
aagtccaaattggagaggacaccccaaaaaaataaccaaggaaaaagaaaaattagtcca
accaaaaaggaatcagaatctaaaaagagcaagctgactcccaaaaaggacagtcctata
aaggcaataaaaaaggaagcaaatgtgtttcggagaggcatggacttcatcgagcaggtg
gcagaagagacagatggcgatagcaagcctaggaatttggctgatgacaggagtgaaagc
aaagtagaaaatttgctctgggtggataaatataagccaacttcactcaagaccataatt
ggacagcaaggtgatcagagctgtgccaataaactattacgctggctccgaaactggcac
aagaattctcctgaagagaaaaaacatgcagcaaaatttggtaaatttgccggcaaagat
gatggttctacttttaaggcagcattgctgtcaggccctcccggtgttggcaagaccacc
acagcttccctggtgtgtcaggaattgggatatagctgtgtggaactaaatgcaagtgat
acgcggagtaagagcagtttgaaggcatctgttgcggaatcactgagtaacaccagcatc
aaaagcttttacccaggtgcagccgtcccgtcaatgagcatgaagcatgctctcatcatg
gatgaagtagacggcatggcaggcagtgaggacaggggagggattcaggaattgattgcc
ctgataaaacaaactaaaattcccattatttgtatgtgcaatgatagaaatcatcccaag
attcgctctttggttcattattgttttgatcttcgttttcaaagacctcgtgttgaacag
attaagggtgctatgatgtctattgcatttaaagagggtttaaagattcctcctccagct
atgaatgagataattttgggagctaatcaagatatcagacaagttttgcacaatctgagt
atgtggtgtgcacgaagtaaggccctaacctatgaccaggccaaggctgattctcagagg
gccaagaaggatatcagactgggcccatttgatgttgcccggaaagtgtttgcagctgga
gaggagactgctcatatgtcacttatggacaaattggatctcttttttcatgactattca
atagcacccctctttgttcaggagaactacctacacgtgaagcctatagccgcggggggt
gacatgaaaaagcacttaatgcttttaagccgagcagcagacagcatatgtgatggtgac
ttagtggacagtcagatccgaagcaagcaaaactggagtcttctgcccactcaggccatt
tatgccagtgttcttcctggagagctgatgagggggtatatgacccagttccccaccttc
ccgagctggctggggaagtactcatctacaggcaaacatgatcgaattgttcaggacctc
gcattacacatgagtcttagaacgtgctccagtaaaaggactgtgaacatggattacctg
tcacacataagggatgcacttgtacagcccttgacctcacagggggtagaaggagtacaa
gatgttgttgcacttatggacacatattacttgatgaaagaagactttgagaatatcatg
gaaattagcagctggggtggcaagcctagtcccttttccaagctggatcccaaggtgaaa
gcggccttcacaagagtgtacaataaggagacccaccttgccccatactcacttcaggta
gcaaagatgtctagacccagcttaggctcagcactggattctgaatacagtgacgagtta
caggaagatgatgctcaggctgatgagaaggaccaggatgcagtagagactgatgctatg
atcaagaaaaagacaaaatcttccaagccttcaaaaccagaaaaagataaggagtccaaa
aaaggaaaaggaaaaagttcaaagaaatga
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