Castor canadensis (American beaver): 109688590 Help Entry 109688590         CDS       T04791                                  Symbol Col3a1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism ccan  Castor canadensis (American beaver) Pathway ccan04611   Platelet activation ccan04820   Cytoskeleton in muscle cells ccan04926   Relaxin signaling pathway ccan04933   AGE-RAGE signaling pathway in diabetic complications ccan04974   Protein digestion and absorption ccan05146   Amoebiasis ccan05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:ccan00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     109688590 (Col3a1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     109688590 (Col3a1)   09152 Endocrine system    04926 Relaxin signaling pathway     109688590 (Col3a1)   09154 Digestive system    04974 Protein digestion and absorption     109688590 (Col3a1)  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     109688590 (Col3a1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     109688590 (Col3a1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     109688590 (Col3a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccan00536]     109688590 (Col3a1) Glycosaminoglycan binding proteins [BR:ccan00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109688590 (Col3a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  109688590 NCBI-ProteinID:  XP_020022654 UniProt:  A0A8B7UUP5 LinkDB All DBs Position Unknown AA seq 1466 aa AA seqDB search MMSFVQKGSWLLLALLHPTIILAQQTSSDSEVGCTYLGQIYQPRDVWKPEPCQICVCDAG SVLCDDIICDEENLDCPHPEIPFGECCAVCPQPSTTSPPPVNGQGPQGPKGDPGPPGIPG RNGDPGTPGQPGPPGPPGIPGICESCPTGGQNYSPQYDSYDVKSGAAVGGAIGYPGPAGP PGPPGPPGSSGHPGSPGSPGYQGPPGEPGQAGPTGPPGPPGAIGPSGPAGKDGESGRPGR PGERGLPGPPGLKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGP QGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGS PGSSGSPGQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLMGARGPPGP PGTNGVPGQRGGAGEPGKNGAKGEPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGL PGAAGERGAPGFRGPAGPNGIPGEKGPAGERGGPGPAGPRGVAGEPGRDGNPGTPGVRGV PGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGG PGGPGLPGPPGKNGETGPQGPPGPTGPSGDKGDSGPPGPQGLQGLPGTGGPPGENGKPGE PGPKGEAGAPGTPGGKGDAGAPGERGPPGLAGPAGLRGGTGPPGPEGGKGPAGPPGPPGA SGTPGLQGMPGERGGPGSPGPKGEKGESGGPGADGAPGKDGPRGPTGPIGPPGPAGQPGD KGEGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGP PGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGNNGNPGPPGASGA PGKDGPPGPAGSNGSPGNPGVAGPKGDAGQPGEKGPPGAQGPPGAPGPLGIAGITGARGL AGPPGMPGPRGSPGPQGVKGESGKPGPSGHNGERGPPGPQGLPGLAGAAGEPGRDGNPGS DGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGP AGSRGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAVGSPGPAGP RGPVGPHGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCG GGAVALAGAGEKSGSFAPYYGDDPMDFKINTEEIMSSLKSVSGQIESIISPDGSRKNPAR NCRDLKFCHPELKSGEYWVDPNQGCKMDAIKVFCNMETGETCINASPLTVPHKNWWTDSG AEKKHVWFGESMDGGFQFSYGNPELPEDVLEVQLAYLRLLSSRASQNITYHCKNSIAYMD QTSGNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAMRLP IIDIAPYDVGGPDQEFGVDIGPVCFL NT seq 4401 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaggggagctggttacttcttgctctgcttcatcccactatt attttggcacaacagaccagttcagattctgaagtaggatgcacctatcttggtcagata tatcagcctagagatgtctggaagccagaaccatgccaaatatgcgtctgtgacgccgga tctgtcctctgcgatgacataatatgtgacgaggaaaacctagactgcccccacccagaa attccatttggagaatgttgtgcagtttgtccacagccttcaacaactagtcctccccct gtcaatggtcaaggacctcaaggccccaagggagatccaggccctcctggcattcctggg agaaatggtgatcctggcaccccaggacagccaggtccccctggtcctcctggcatccct ggaatctgtgaatcatgtcctactggtggtcagaactattctccccagtatgactcatat gatgtcaagtctggagcagcagtaggaggagcaattggctatcctggccctgctggaccc ccaggacctccaggtccccctggttcatctggtcatcctggctcccctggttctccagga taccaaggtccccctggtgaacctgggcaagctggtcctacaggtcctccaggacctcct ggtgctataggtccatctggccctgctggaaaagatggagagtcaggaagacccggaaga cctggagagcgaggattgcctggacctccaggtctcaaaggcccagctggcatacctgga ttccctggtatgaaaggacacagaggctttgatggacgaaatggagaaaagggtgaaaca ggtgctcctgggctaaagggtgaaaatggtcttccaggtgaaaatggagctcctgggccc cagggtccgagaggggctcctggtgagagaggacgaccaggacttcctggagctgcaggg gctcgcggtaacgatggtgctcgaggtagcgatggtcaaccaggcccacctggtccccct ggaactgcaggattccctggatcacctggtgctaagggtgaagttggacctgcagggtcc ccaggttcaagtggctcccctggacaaagaggtgaacctggacctcagggacatgctggt gctcaaggtcctcctggccctcctgggaataatggcagtcctggtggtaaaggagaaatg ggtccagctggcattcctggagcacctggactcatgggagctcggggtcctccaggacca cctggcactaatggggttcctgggcagcgaggtggagcaggtgaacctggtaaaaatggt gccaaaggagagcctggaccacgtggtgaacgtggagaagctggttccccaggtattcca ggtccaaagggtgaagatggcaaagatggatcacctggagaacctggtgcaaatggactt ccaggtgctgcaggagaaaggggtgcccctggattccgaggacctgcagggccaaatggc attccaggagaaaagggtcccgctggggagcgtggtggtccaggtcctgcaggacccaga ggtgtggctggagaacctggcagagatggcaaccctggaactccaggagtaaggggtgtg cccggaagcccaggaggaccaggcagtgatgggaaaccaggccctcccggaagtcaagga gaaagtggccgcccaggtcctcctgggccatctggtccccgaggtcagcctggtgtcatg ggtttcccaggtcctaaaggaaatgatggtgctcctggcaagaatggagagcgaggtggc cctggagggcccggccttccgggtcctcctggaaagaatggagaaactgggcctcagggt cccccaggacctactgggccatctggtgacaagggagactcaggaccccctggtccacag ggattacaaggcttgcctggtaccggtggtcctccaggagaaaatggaaaacctggtgaa ccaggtccaaagggggaagctggtgcacctggaactcccggaggcaagggtgatgctggt gcccccggtgaacgtggaccccctggattagcagggcctgcaggtcttagaggtggaact ggtccccctggtcccgaaggaggaaagggccctgctggtcctcctggaccacctggtgct tctggtactcctggtttacaagggatgcctggagagagagggggccctggaagtcctggt ccaaaaggtgaaaagggtgaatcaggcggtccaggtgcagatggtgctccaggaaaagat ggtccaaggggtcccactggtcctattggcccccctggcccagctggtcagcctggagat aagggtgaaggtggtgctcctggacttccaggtatagctggacctcgtggtggccctggt gagagaggtgaacatgggcctccaggacctgctggcttccctggtgctcctggacagaat ggtgagcctggtgctaaaggagaaagaggtgcccctggtgagaaaggtgaaggaggcccc cctggagtagcaggaccccctggaggttctgggcctgctggtcctcctggtccccaaggt gttaagggtgaacgtggcagtcctggtggtcctggtgctgctggctttcctggtgcacgt ggtcttcctggccctcctggcaataatggtaacccaggaccccctggtgccagtggtgct ccaggtaaagatgggcctccaggtcctgcaggaagcaatggttctcccggcaaccctggg gtggctgggccaaaaggtgatgctggtcagcctggagagaaaggaccacctggtgctcag ggtcctcctggagctccaggcccacttggaattgcagggattacaggagcacgaggtctt gcaggaccaccaggcatgcccggtcctcggggaagccctggtcctcaaggtgtcaagggt gaaagtgggaaaccaggacctagtggccacaatggggaacgcggtcctcctggaccccag ggtcttcccggccttgctggtgcagctggtgagcctggaagagatggaaaccctggatca gatggtctgccaggccgagatggatctcctggtggcaagggtgatcgtggtgaaaatggc tctcctggtgcccctggtgctcctggtcatccaggccctcctggtcctgttggtccagct ggaaagaatggtgacagaggagaaactggtcctgctggtccttctggtgctccaggtcct gctggttcccgaggtgctcctggtccccaaggcccacgtggtgacaaaggtgaaactggt gaacgtggttctaatggcatcaaaggacatcgaggatttcctggtaatccaggtccccca ggttctccaggtgctgctggccaccagggtgctgttggaagtccaggacctgcaggcccc agaggacctgttggaccacatgggcctcctggcaaagatggaacaagtggacacccaggt cccattggaccaccaggacctcgtggtaacagaggggaaagaggatctgagggctcccca ggccacccaggacaaccaggccctcctggaccccctggtgcccctggcccttgctgtggt ggtggggctgttgcccttgctggagctggcgaaaaatctggtagttttgcaccgtattat ggagatgacccaatggatttcaaaatcaacaccgaagagattatgtcctcactcaaatct gttagtggacaaatagaaagtatcattagtcctgatggttctcgtaagaaccctgctcgg aactgcagagacctgaaattctgccatcctgagctcaagagcggggagtattgggttgat cctaaccaaggttgcaagatggatgctatcaaagttttctgtaacatggaaactggggaa acatgcataaatgccagtcctttgactgttccacataagaactggtggacagattccggt gccgagaagaaacacgtttggtttggagagtccatggatggtggttttcagtttagctat ggtaatcctgagcttcctgaagatgtcctggaggtacaattggcataccttcgacttctc tccagccgggcttcccagaatattacatatcactgcaaaaatagcattgcatacatggat cagaccagtgggaatgtgaaaaaagccttgaagctgatggggtcaaatgaaggtgaattc aaggccgaaggaaacagcaaattcacatacacagttctggaggatggttgcactaaacat actggggaatggagcaaaacagtctttgaatatcgaacacgcaaagccatgagattacct attattgatattgcaccctatgatgttggtggtcctgatcaagaatttggtgtggacatt ggccctgtttgctttttataa

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