Castor canadensis (American beaver): 109688983
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Entry
109688983 CDS
T04791
Symbol
Clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109688983 (Clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109688983 (Clp1)
Enzymes [BR:
ccan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
109688983 (Clp1)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
109688983 (Clp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
ATP_bind_1
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
109688983
NCBI-ProteinID:
XP_020023201
UniProt:
A0A250YHP8
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG
AKVAIFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaagccaatgatgacaaaaagccaacgactaaatttgagctagagcgggaa
acagaacttcgctttgaggtggaagcgtctcagtcagtacagttggaattgttgactggc
atggcggaaatctttggcacagagctgacccgaaacaagaaattcacgtttgatgctggt
gcaaaggtggcaatttttacttggcatggctgttctgtgcaactgagtggccgtaccgag
gtggcttacgtctctaaagatacccctatgttgctttacctcaacactcatacagcccta
gagcaaatgcgaaggcaggccgaaaaggaagaagagagaggtccccgagtgatggtagtg
ggccccactgatgtgggcaagtccacagtatgtcgccttctgctgaactacgcagtgcgt
ttgggacgtcgtcctacttatgtggagctagatgtgggccagggttctgtgtccatccct
ggtactatgggagccctctacattgagcggccagcagatgttgaggaaggtttctctatc
caggcccctctggtatatcattttggttctacaacccctggaaccaacatcaagctttat
aataagattacatcacgtttggcggatgtgttcaaccaaaggtgtgaggtaaaccgaagg
gcgtctgtgagtggctgtgtcattaacacctgtggctgggtgaagggctctggttaccag
gccctggtgcatgcagcctcagcttttgaagtggatgtggttgtggttctggatcaagaa
cgactgtataatgaactcaaacgggacttgcctcactttgtccgtactgtgctgctccct
aaatcagggggtgtagtggagcgctccaaggacttccggcgggaatgtagggatgagcgt
atccgtgagtatttctatggattccgaggctgtttctatccccatgctttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtttacct
ttgggcatgtctcaggaagacaaccagctcaagctagtacctgtcacacctggcagagat
atggtgcatcatcttttgagtgttagcactgctgagggtacagaggagaacctttctgag
acaagtgtggctggtttcattgtggtgaccagtgtggacctggagcatcaggtgtttact
gttctgtctccagcgccccgcccattgcctaagaacttccttctcatcatggatatacgg
ttcatggatctcaagtag
DBGET
integrated database retrieval system
