Castor canadensis (American beaver): 109689403
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Entry
109689403 CDS
T04791
Symbol
Nup88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109689403 (Nup88)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109689403 (Nup88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109689403 (Nup88)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109689403 (Nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
DUF7344
DUF659
FliJ
Motif
Other DBs
NCBI-GeneID:
109689403
NCBI-ProteinID:
XP_020023835
UniProt:
A0A250YL41
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MAAAEGSAGDGELWQTWLPNHVVFLRLQEGLKNQNPTEAEKPASSSLPSPPPLPPQLLMR
NLVFGLGGELFLWDGESSSFLVVRLRGLGGEEPALSQYQKLLCINPPLFEIYQVLLSPTH
HHVALIGIKGLMVLELPKRWGKNSEFEGGKATVNCSTTPIAERFFTSSTSLTLKHAAWYP
SEMLDPHIVLLTSDNIIRVYSLREPQTPTKVIILSEAEEESLILNKRRTYTASLGETAVA
FDFGPLAAVPKNVFGQKSKDEVVAYPLYILYENGETFLTYVSLLHSPGNIGKLLGPLPMH
PAAEDNYGYDACAILCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDYRIDLI
PSLYVFECVELELALKLASGEDDPFDSDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTW
IHKLHKFLGSDEEDKDSLQELAAEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGPTM
ICITSSCECLIRPLLSTVHPASPPLLCTREDAEVAESPLRILAEAPDSFEKHIRSILQRS
AANPAFLKSSEKDLAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQKKK
QLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKVLHSFHSQLPVLSDSERD
MKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQKPTITLSAYQRKCIQSILKE
EGEHIREMVKQINDIRNHVNF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgaagggtctgcgggcgatggtgaactatggcagacctggttacctaac
cacgtcgtgttcttgcggctccaagagggactgaaaaaccagaatccaactgaagccgaa
aaaccggcatcttcatcattgccctcgccgccgcctctgccgccgcagttgctgatgaga
aatctggtgttcggcctcggcggagaactcttcctgtgggacggagaaagcagctccttc
ttagtggttcgccttcggggcctcggcggcgaggagcccgccctttcgcagtaccagaaa
ttgctttgcataaatccacccctatttgaaatttatcaagtcttgttaagtccaacacac
catcatgtagcacttataggaataaaaggacttatggtactagaattacctaaaagatgg
ggaaagaattctgaatttgaaggtggaaaagcaacagtgaattgtagtactactccaatt
gctgagaggtttttcaccagttctacctctctgactctaaagcatgctgcctggtatcca
agtgaaatgctggatcctcatatagtgctgttaacatcagacaatataataagagtttac
tctttacgtgagcctcaaactccaactaaggtaattatactttcagaagcagaagaggaa
agtttaattctcaataaaagaagaacatacactgcatctctaggagagacagcagttgca
tttgactttgggccattggcagcagtcccaaagaatgtatttggacagaaaagcaaagat
gaagtagtggcatacccactgtacatcttatatgagaatggggagaccttccttacatat
gttagtctgttacacagccctgggaatattggaaagctgctaggtccattgcccatgcac
cctgcagctgaagataactatggttatgatgcttgtgctatactctgcttaccctgtgtt
cccaacatattagtgattgcaactgaatcaggaatgctgtaccactgtgttgtgctagaa
ggagaagaagaagatgaccaaacctcagaaaagtcctgggattacaggattgacctcatt
ccttctttgtatgtgtttgaatgtgttgagttggagcttgccctgaaattggcatctgga
gaggatgatccctttgattctgacttttcttgtccaatcaaacttcaccgagatcctaag
tgtccttcaagatatcattgtactcatgaagctggtgtacacagtgtcgggctaacttgg
attcataaactccacaagtttcttggatcagatgaagaagataaggatagtttacaagaa
cttgctgcagaacagaagtgctttgtagagcacatcctttgtacaaagccattgccatgc
aggcagccagctccaattcgaggattctggattgtcccggacatattggggcccacaatg
atctgcatcaccagtagctgtgaatgcctcataaggcccttactaagtacagtacatccg
gcatctcctcccctgctgtgtacccgagaagatgctgaagtggcagaatctcccctccgt
attctggctgaagcaccggattcctttgaaaagcacattagaagcattttgcaacgtagt
gccgccaatccagcatttttgaaatcatctgaaaaagacttggctcctcctcctgaagaa
tgtcttcagctcatcagcagagccacccaggtgttcagagaacagtacattcttaagcag
gacctggcaaaggaagagattcagcggagggtcaaattattatgtgaccaaaaaaagaaa
caactggaagatctcaattattgtcgagaagagaggaaaagtctacgggaaatggctgag
cgtttagctgacaaatatgaggaagccaaggaaaaacaagaagatatcatgaacaggatg
aaaaaagtacttcacagttttcactctcaactcccagttctctctgatagtgagagagac
atgaagaaagaattacagctgatacctgatcaacttcgacatttgggcaatgccatcaaa
caggttaccatgaaaaaagactatcagcagcgaaagatggaaaaggtgcttagtcctcaa
aaacccaccattacactcagtgcctaccagcggaagtgcattcagtccatcctgaaagag
gagggtgaacacataagggaaatggtgaagcaaatcaatgatatccgaaatcatgtgaac
ttctaa
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