Castor canadensis (American beaver): 109689430
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Entry
109689430 CDS
T04791
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109689430 (Ddx1)
03016 Transfer RNA biogenesis [BR:
ccan03016
]
109689430 (Ddx1)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109689430 (Ddx1)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109689430 (Ddx1)
Transfer RNA biogenesis [BR:
ccan03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
109689430 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
109689430
NCBI-ProteinID:
XP_020023871
UniProt:
A0A250YL16
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEVPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALCKAPDSYVVKSQHTGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaagagatg
gattggcttctcccaactgatatccaggctgaatctatcccgctgatcctgggaggaggt
gatgtacttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaagggaaaaaccaca
ataaaaacgggtgcttcagtgctcaacaaatggcaaatgaatccatatgatagaggttct
gcttttgcaattgggtcagatggtctttgttgtcaaagcagagaagtaaaggaatggcac
gggtgcagagctactaaaggattaatgaaagggaaacactactacgaggtgtcctgtcac
gaccaaggattgtgcagagtcgggtggtctacgatgcaggcctccttagatctagggact
gacaagtttggatttggctttggtggaacaggaaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgatactattggatgttatctagatatagataaa
gggcatgtcaagttctccaaaaatggaaaagatcttggtttggcctttgaagtaccacca
cacatgaaaaatcaagccctctttcctgcctgtgttttgaagaatgctgagctgaaattt
aactttggtgaagaagaatttaagtttccacctaaagatggttttgttgctctttgcaag
gcaccggatagttatgttgtcaaatcgcagcacacaggtaatgcgcaagtgacacaaaca
aagtttctccccaatgctccaaaagctctcattgttgaaccctcccgggagttagctgaa
caaactttgaataacatcaaacagtttaagaaatatattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcacgggatcagctctctgttttagataatggggta
gatattgtcgtaggtactccaggaagactagatgatttggtgtcaactggaaagctgaac
ttatctcaagtcagattcttggtcctggatgaagctgatgggcttctttctcaaggttat
tctgattttataaataggatgcacagtcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtttgttctgctactttgcattcttttgatgtaaagaagttatctgaa
aagataatgcattttcccacatgggttgatttaaaaggagaagattctgttccagatact
gtacaccatgttgttgtccctgtgaatcccaaaactgacagactctgggaaagactggga
aaaagccacatcagaactgatgatgtacatgcaaaagacaacacaagaccaggagctaac
agtccagagatgtggtcagaagctattaagatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattatcttctgtagaaccaaaattgactgtgat
aacttggagcagtactttatgcaacaaggaggaggacctgataagaaaggacaccagttc
tcgtgtgtttgtcttcatggtgacagaaagcctcatgagagaaagcaaaacttggaaaga
tttaagaagggagacgtaagattcttgatttgtacagatgtagctgctcgaggaattgat
atccatggtgttccttatgttataaatgtcaccctgcctgatgaaaagcaaaactacgta
caccgaattggcagagtaggaagagcagaaaggatgggtctggccatttcgctggtggca
acagaaaaagaaaaggtttggtatcatgtgtgtagcaatcgtgggaaaggatgttacaac
acaagactgaaggaagatggtggctgtaccatatggtataatgagatgcagctgttgtct
gagatagaagaacacctgaactgtaccatttctcaggttgagccagatataaaagttcca
gtggatgagtttgatgggaaagttacctatggtcaaaaaagggctgctggaggtggaaat
tataaaggccacgtggatattttggcacctactgttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcccaaccagctgttcagaaccttc
tga
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