Castor canadensis (American beaver): 109689507
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Entry
109689507 CDS
T04791
Symbol
Taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109689507 (Taf1c)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109689507 (Taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
109689507
NCBI-ProteinID:
XP_020023978
UniProt:
A0A250Y5N5
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MDFPSSLRPALFMTGPLGMSSVPDLSFMCSWRDVLTLPESQPHNSKDGALQLVKDLLWEP
ATPGPLPLLPPGPDPWDPGVTARDVLFRGAYHYRKQPQVVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGRRSHSKKMTVVSVKRLLQDLGGHQPWGCPWAYLSHRQRRFSLLGGP
VLSRAVSSLLGQLLHEELALRWEQLLLDEAFTGGALAWIPGRTAEAGQLVFPAGGALDRL
QFQEVSLTSGGNPQVLGDPGCIQLRGPVRQVVTSTIQGETLLAVRSDYHCAVWKVGKQGC
PALLQVLQVRKGATGISLSPHLPGELAICSRSGAVCLWTPQDGLQQVYKDPDTLVFRDPS
PWRWADFTAHPRVLTVGDRTGVKMIDTQGPPGCGLLLFRGGAEASCQKGERVLLAQYLGH
SGSGSFSPTVHLICTQFSLYLMDERLPLVPMLKWDHGLPSAPLLACLLPPAGPSCPQPLL
LGAQGGQLQLLHITGDGASMTRLAGPPQSLPSSTDSLSAFPLLEPKSQRQLQERLEAPTI
GLAAAIPPCASVPGLSLFQLSAAGDVFYQHLCLHAASSLGGDAESPGDPRPECLPPSATV
CPLDQSPTPYWTPQATAHCSRWLEALLQVPPVSPTWAAPTFSHRQLLRRLELQQSNGRVV
QSLRTAMAEGQLLQRRDLSSLPAAEPPPAPESDLQDELSERLGEAWEGRGAAWWERQQGR
NSGPGKQAKRPKRRTQLSSTFSSLTSCLDLPETNSSPRHPDQTPSEAGTQGVQPESQQTL
WDYMAKLPLQDTPRCAIMSPSQASSIQATPSLQQTPVLSGCKPLRKKPRMGF
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccgagctccctccgccctgcattgttcatgactggtccccttggcatgagc
agtgtccccgacttgtcctttatgtgcagctggagagatgtcctgaccttgccagagtct
cagccccataactccaaggatggggctctgcagttggtgaaggatctgttatgggagcca
gcaactccaggacccctacccctgctgcctcctggtcctgatccctgggaccctggcgtg
actgcccgggatgtccttttccgaggagcttaccactaccggaagcagccccaagttgtg
ctggatgttactgaacagctcagtaggttcctgtgggatcatggggacatagcctttgca
ccgctaggaaagctgatgctggagaatttcaaactggagggacgccggagccactctaag
aagatgacagtagtcagtgtgaagagactgctacaggacctcggtggacatcagccctgg
gggtgtccctgggcttacctcagccaccggcagcgccgcttctccctcctcgggggccca
gtcctgagcagggctgtgtcaagcctcctggggcagctgctgcatgaggaactggccctg
cggtgggagcagctgctgctggacgaggccttcactggaggcgccttggcctggattcct
ggccgaactgcagaggccgggcagctggtcttccctgctggaggtgctctggacaggcta
cagttccaggaggttagtctgacctcaggtggcaacccccaggtcctaggggatcctgga
tgcatccagctccgtggacctgtccggcaagtggtaacctccaccatccagggagaaacg
ctgctggctgtccgctctgactaccactgtgctgtgtggaaggttggcaagcaggggtgc
ccagcccttcttcaggtgctacaggtcaggaagggcgccaccgggattagtctcagccct
caccttcccggggagctggccatctgcagccgctctggagccgtgtgtctgtggaccccc
caggatggactgcagcaagtctacaaggaccctgatacccttgtgttccgggacccttct
ccctggcgctgggcagactttactgcccaccctcgggtgctgactgtgggtgaccgcact
ggcgtgaagatgatcgacactcagggccccccaggctgtgggctgctgcttttccgtgga
ggagcagaggcgtcctgtcagaaaggggaacgtgtgctgcttgctcagtacctaggccat
tcgggttctggatctttctctcccactgtgcacctcatctgtactcagttctctctctac
ctgatggatgagcgcctccccctagtgccaatgctgaagtgggaccatggcctgccctct
gctcccctgctggcctgcctgctgcctcctgctggacccagctgcccacagcccctgctt
ctcggggcccagggcgggcagctgcagctcctgcacatcacaggagacggggcctccatg
acccggctggcagggcccccccagtctctgccctccagcactgactccctgtctgccttt
cccctgttggagcccaagagccagcggcaactgcaagagcgtctggaagccccaaccata
ggtctggctgctgccatcccaccctgtgcctctgtgccgggcctgtcactcttccagctc
tcagcagctggggatgtcttctatcagcacctctgcctccatgcagcctcaagccttgga
ggagatgcagaatcgccgggtgaccccaggcctgagtgccttccccccagtgcaacagtg
tgccccttggaccagtcacccacaccctactggaccccccaggccactgcccactgcagt
cgctggctggaggccctgctacaggtacctcctgtgtcccccacatgggctgcacccacc
ttctcccaccgccagctgctgagacgcctggagctgcagcagagcaatgggagagtggta
cagtctctccggacagccatggctgaagggcagctcctgcagcgcagggacctcagctcg
ctcccggcagcagagccgccccctgcaccagagtcggacctgcaggatgagctcagtgag
cgtttgggggaagcctgggaaggccgaggggctgcttggtgggagagacagcagggcaga
aactcgggacctggcaaacaggccaagcgacccaagcgccggactcagctatccagtacc
ttctcctcgctcacgagctgcttggatctaccagaaaccaacagcagccctcgccaccca
gaccagaccccatcagaggccgggacacagggtgtccagccagagagccagcagaccctt
tgggactacatggccaagctgccacttcaggacaccccaaggtgtgccatcatgtccccc
tcccaggcctccagcatccaggccactccctccttgcagcagacacccgtcctctctggc
tgcaaacccctccggaagaagccacgcatgggcttctga
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