Castor canadensis (American beaver): 109689574 Help Entry 109689574         CDS       T04791                                  Symbol Skiv2l Name (RefSeq) helicase SKI2W isoform X1   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism ccan  Castor canadensis (American beaver) Pathway ccan03018   RNA degradation Brite KEGG Orthology (KO) [BR:ccan00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109689574 (Skiv2l)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccan03019]     109689574 (Skiv2l) Enzymes [BR:ccan01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      109689574 (Skiv2l) Messenger RNA biogenesis [BR:ccan03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      109689574 (Skiv2l)   mRNA degradation factors    3'-5' decay     Ski complex      109689574 (Skiv2l) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII DUF3516 Motif Other DBs NCBI-GeneID:  109689574 NCBI-ProteinID:  XP_020024079 UniProt:  A0A8B7UYM9 LinkDB All DBs Position Unknown AA seq 1246 aa AA seqDB search MMETERLVLPPADPLNLPLRAVELGCTGRWELVNVPGAPESTLPHGLPPCAPDLQQEAEK LFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAALGAPVPSDLQAQRHPTTGQILGYKEVL LENTNLSATTSLSLRRPPGPVSQSLWGNPTQYPFWPGGMDEPTITDLSTQEEAEEDIDFE KDLLTVPPGFKKGVDFAPKDHHAPAPGLLSLSRLLEPLDLGGGDEDESETVKQPGGPQGD TVSASPCSGPLARASSLEDLVLKEASTVVTPLEPPKPPPQEQWAVPVDVTSPVGDFYRLI PQPAFQWAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST VARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI HLFLQRCLTRLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK GRVPEMADLHRMMMGKPSQLQSQFRLTYSMILNLLRVDALRVEDMMKRSFSEFPSRKDSK AHEQALAELTKKLGALEEPDMTGQLVDLPEYYSWGEELTETRNMIQRRIMESVNGLKSLS VGRVVIVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKLVSEDPQDRGPATPDVPHPDD LVGFKLFLPEGPCDHTVAKLQPGDVAAITTKVLRVNGEKILEDFSKRQQPKFRKDPPLAA VTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIQGAQCVHSPRF PTQYLKLRERMQIQKEMEHLHFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV ACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPNALKEGVERVRA VAKRIGEVQAACGLNQTVEEFVEELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ NT seq 3741 nt NT seq  +upstreamnt  +downstreamnt atgatggagaccgagcgactcgtgttgcctcccgcagatcccctcaacctgccacttcga gccgtggaactgggatgtacagggcgttgggagctggtgaacgtacctggggctccagag agcacccttccccatggcctccctccctgtgctccagatctacagcaagaagcagagaag ttgtttctctcatctccagcctggcttcctcttcatggtgtggagcactcagctcgaaaa tggcagagaaagacagatccctggtctctcctggctgccttgggggctccagtaccatct gatcttcaagcccaaagacacccaaccacaggacagatactgggctacaaggaggtactg ctggagaacacaaacttgtcagccacaacctctttgtctcttcgccggcctccagggcca gtctcccaatcactatgggggaatccaacacagtaccctttctggccaggtgggatggat gagcccaccataacagatctgagcactcaagaggaggcagaggaagatatagactttgaa aaagatcttctcactgtcccacctggcttcaagaaaggtgtggactttgcccccaaggat caccacgctccagctcctgggcttctcagcctcagccgtctgctggagcctttagatttg ggtgggggtgatgaggatgagagtgagacagtgaaacagccaggaggtccccaaggggac actgtttcagcctctccctgtagtggtcctctggctcgagcaagtagcttggaggaccta gtgttgaaggaagcatccacagttgtaacccccttggagcctcccaaacctccacctcag gagcagtgggctgttccagtggatgttacctcccctgttggtgatttctaccgactcatt ccccagccagccttccagtgggcatttgagccagatgtgtttcagaaacaggccatcctg cacttggaacagcatgactctgtctttgtcgcagctcacacatctgcggggaagacagtt gtggctgaatatgccattgcactggcccagaaacacatgacacgaaccatatatacttca cctatcaaggctctgagcaaccagaagttccgggacttccgaaacacatttggggatgtg gggctgctcactggagatgtgcagctgcacccagaggcctcttgcctcattatgacaaca gagatccttcgctccatgctatacagtggatcagatgtcatccgagacctggagtgggtc atctttgatgaggttcactatatcaatgatgctgagcgtggggtcgtgtgggaggaggtg ctcatcatgctccctgaccatgtctccatcatccttctgagtgctaccgtccctaatgcc ctggagtttgctgactggattgggcggctgaagcgtcgtcagatctatgtgatcagcacg gttgcccgacctgtccctctggagcactatctctttacagggaacagtcccaagactcag ggagagctcttcctgctgctggactcccgaggggccttccacaccaaggggtattatgca gctgtagaggccaagaaagagagaatgagcaaacatgcccagacctttggggccaagcag cccacacaccaggggggccctgcacaggaccgcggagtgtacctgtccctcctggcctca ttgcgcacccgggcccagctgcctgtggtggtattcaccttctctcggggccgctgtgat gaacaggcctcaggcctcacctcacttgatctcaccacaagttcagagaagagtgagatc cacctcttcctgcagcgctgcctcacacgtctccgtggctctgaccgccagctgccccag gtcctgcacatgtctgagcttctgcatcgtggcctgggtgtgcaccatagtggtatccta cccatcctcaaggagattgtagagatgttattcagccgtggcttggtcaaagtcttgttt gccactgagacttttgccatgggtgtaaacatgccagcacgtacagtggtgtttgactcc atgagaaaacacgacggctctaccttccgggatctgctccctggagaatatgtgcagatg gcaggccgggccggccggaggggcctggaccctacaggcactgttatcctgctgtgcaag ggccgtgtgcctgagatggcagatctgcaccgcatgatgatggggaagccatcccagctg cagtcccagttccgcctcacgtatagtatgatcctcaacttgctacgggtggatgctctt agagtggaggacatgatgaagaggagcttttctgagtttccatctcgcaaggatagcaag gcccatgagcaggctctagctgaactaaccaagaagctgggagccttggaggaacccgac atgactggacaactggttgacctgcctgaatattatagctggggggaggaactgacagag acccggaacatgatccagcgacgcatcatggagtctgtaaatgggctgaaatctctctca gtgggaagggtggtgattgtgaagaatcaggagcatcacaatgcattgggtgtgatcctt caggtctcctcaaactctaccagcagagtcttcacaaccctggtcttgtgtgataagctt gtgtctgaggacccacaggacagggggccagccactccagatgtacctcatccagatgac cttgtgggcttcaagctattcctgcctgaagggccctgtgaccacactgtggccaagctc cagccaggagatgtggctgccatcaccacaaaggtgcttcgggtgaatggggagaagatc ttagaggacttcagcaagagacagcaaccgaaattcaggaaagatcctccccttgcagct gtgacaactgctgtccaggaattgctacgtcttgctcaggcctacccagcaggacccccc acccttgaccctgtcaatgacctgcagctcaaggatgtgtctgtggttgaaggtgggctc cgggcccgaaagctggaggagctgatccagggggctcagtgtgtacatagcccccgtttt cctactcagtatctaaagctgcgggagcgaatgcagatacagaaggagatggagcacctg cacttcctactgtccgatcagtcactgctgctgctccctgagtaccaccagcgagtagag gtgctccgaaccctgggttatgtggatgaggcgggcactgtgaagctggcaggacgggta gcttgtgccatgagtagccacgagttgctcctcactgagctcatgtttgacaatgcattg agcactctgcgacctgaagagattgcggctctgctctctggtctggtctgccagagccct ggggaccctggggatcagctcccaaatgcccttaaggagggggtagaacgtgtccgggct gtggctaagcggattggtgaagtccaggcagcctgtggtctgaaccagacagtggaggaa tttgtagaggagctgaattttgggctggttgaggttgtgtatgagtgggcccggggcatg ccattctctgagttagcagggctctctgggacccctgaaggcctggtggtccgctgcatc cagcgcctcgctgagatgtgtcgctcactgcgaggggcagcccgcctggtaggggagcct gtgctgggcgccaagatggagacagcagccactctgctacggcgggacatcgtttttgca gccagcctttatacccagtga

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