Castor canadensis (American beaver): 109689655
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Entry
109689655 CDS
T04791
Symbol
Exosc10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109689655 (Exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109689655 (Exosc10)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109689655 (Exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
109689655
NCBI-ProteinID:
XP_020024187
UniProt:
A0A8B7UYS7
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MAPPSLREPKGPLATSETKPDGEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSKVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVNKHQQPVLPAGLQVPKTIVSSWNRKAGEYGKKAKSETFRLLHAKNI
IRPQLKFREKIDNSNTPFLPKIFVKPNAQKPLPQALSKERRERPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPQPQLYRPVEETPCHFVSSLDELVEL
NEKLLSCKEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESFTDPS
VVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLRLYCSVESNKQYQ
LADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNDQPVQLQVVWQRSRDLCLKK
FIKPIFTDESYLELYRKQKKHLNSQQLAAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEAAAGVKKSGPLPSAE
RLENTLFGPHDCSHAPPDSSLITSTVGSVPAQKQASLFADRKEETLLDSKCLLATAIITL
FNEPSAEENGKTPLTVAQKKAQNIMESFENPFRMFLPSKDHRAHISQAAKFDPSSKIYEI
SNRWKLASQVQVQKESKETAKKKAADQTAAREQAKEEFKATAEQTVSVRQQAALENAAKK
RERTTSDPRSTELKQEKKRLKTSKKLKNPDPPQSDFTPYDYSQSDFKAFAGDSKCKPSSQ
FDPNKQMASGKKCIAAKKLKQSVGNKSMSFPNGKSDRGFRHNWPKR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccagtctccgggagcccaagggcccgttggcgaccagcgagaccaagccc
gacggggagatggtgctgccgggcttcccggacgcagacagctttgtgaagtttgctctt
gggtcagtggtggcagtcaccaaggcatctgggggcctaccacagtttggcgatgaatac
gatttttaccgaagttttcctggcttccaggcattttgtgaaacacagggagacaggctg
cttcagtgcatgagcaaggtaatgcagtaccatgggtgtcgtagtaacatcaaggatcga
agtaaagtgactgagttggaggacaaatttgatttactagttgatacgaatgatgtgatt
ctggagagagtgggtatcttactggatgaagcatcaggtgtgaataaacatcaacagcct
gtcctccctgcaggattgcaagtccccaaaacaatagtgtccagctggaaccgaaaggcg
ggagaatacggcaaaaaagcaaaatctgaaactttccgactgcttcatgcaaaaaacatc
attcgacctcagctcaaatttcgagagaagattgacaattccaacacgccatttcttcct
aaaatctttgtcaaacccaatgctcagaaacctctccctcaggctctctctaaagaaagg
agggaacgcccacaggaccgtcctgaggacttggatgtcccccctgccttagcagatttc
atccatcagcagagaacccagcaagttgagcaggacatgttcgcacatccttatcagtat
gaactcgatcactttactccaccagactcagtacttcaaaagccacaaccccagttatac
agacctgtagaggaaaccccatgccattttgtatcctccctggatgaacttgtggaactc
aatgaaaagctcttaagttgcaaagaatttgcagtagatttggagcaccactcctacagg
agcttcctaggactgacctgcctgatgcaaatttccacccgcacagaagacttcatcata
gacaccctggagcttcgcagtgacatgtacatcctcaatgagagcttcacagacccctct
gtcgttaaggtgttccatggtgctgactctgatatagagtggctacagaaagactttggg
ttgtatgtggtaaacatgtttgacacccaccaggcggcacgccttctcaacctgggccgg
cactcgcttgatcacctgctgagactatactgcagcgtggagtcaaacaaacagtatcag
ctggcagactggaggatacgccctctgccagaagaaatgctcagttatgcccgggatgac
acccattacctgctttatatctatgacaaaatgaggctggagctgtgggaacgaggcaac
gaccaaccagtccagttgcaagtggtatggcagcggagcagggacctctgtctgaagaaa
ttcatcaaacctatcttcacggatgagtcataccttgaactgtatcggaagcaaaagaag
catctcaactcgcagcagctggcagcctttcagctgctgtttgcctggagggataaaaca
gctcgcagggaggatgagagctatggatatgtactgccaaaccatatgatgctgaagata
gctgaagaactgcctaaggaacctcagggcatcatagcttgctgcaacccagtgccgcct
cttgttcggcagcagatcaatgagatgcacctcttaatccagcaggctcgagagatgccc
ctgctcaagtctgaagctgcagctggagtgaagaagagtggacccctgcccagtgctgag
agactggagaacactctctttggacctcatgactgctcccatgctcctccagacagctcc
ctgatcacctcaactgttggatctgtaccagctcagaaacaggcaagcctctttgctgac
agaaaagaggagaccttgctggactccaaatgccttcttgctacagccatcatcacgtta
tttaatgaacctagtgctgaggaaaatggaaagactccattgacagttgcacagaaaaaa
gcccagaacataatggaatcctttgagaacccatttaggatgttcctgccatcaaaagat
caccgggctcacatctcccaggcagcaaagtttgacccatcttcaaaaatctatgaaata
agcaaccgttggaagctggccagccaggtacaagtccaaaaagaatctaaagaaactgcc
aagaagaaggcagctgatcagacagctgcccgggaacaggcaaaggaggaattcaaagcc
acagcagaacagacagtctctgtgcgacagcaggctgcgctagaaaacgctgctaagaag
agagagagaaccacaagtgacccaaggagcacagaactgaaacaagagaagaaacgactc
aaaacctccaagaagctgaagaacccagatccaccacaaagtgatttcaccccttatgac
tacagccagtcggacttcaaggcttttgctggagacagcaaatgcaagccctcctcccag
tttgacccaaataagcagatggcatctggcaagaaatgcattgcagccaaaaaacttaaa
caatcagtgggaaacaaaagcatgtcctttccaaatggaaaatcagacagaggattccgg
cacaactggccaaagagatag
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