Castor canadensis (American beaver): 109689822
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Entry
109689822 CDS
T04791
Symbol
Rora
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04659
Th17 cell differentiation
ccan04710
Circadian rhythm
ccan05017
Spinocerebellar ataxia
ccan05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
109689822 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
109689822 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
109689822 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109689822 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109689822 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccan03310
]
109689822 (Rora)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109689822 (Rora)
Nuclear receptors [BR:
ccan03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109689822 (Rora)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109689822
NCBI-ProteinID:
XP_020024453
UniProt:
A0A8B7UYA5
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Position
Unknown
AA seq
468 aa
AA seq
DB search
MMYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYNISANGLTELHDDLSTYMDGHXPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNVSKSHLETCQYLREEL
QQIMWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNAVYFDGKYASPDVFRSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLTAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatcgcagcgatgaaagctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattatggtgtcattacgtgtgaaggctgcaagggc
tttttcaggagaagtcagcaaagcaatgccacctactcctgtcctcgtcagaagaactgt
ttgattgatcgaaccagtagaaaccgctgccagcactgtcgattgcagaaatgccttgct
gtggggatgtctcgagatgctgtgaaattcggccggatgtcgaaaaagcagagagacagc
ttgtatgcggaagtgcagaagcaccggatgcagcagcagcaacgggaccaccagcagcag
ccaggagaggctgagccactgacacctacctataatatctcggccaacgggctgacggag
ctgcacgacgacctcagcacctacatggacgggcacnaccccgagggcagcaaggccgac
tctgccgtcagcagcttctacctggacatacagccctccccagaccagtcggggcttgat
atcaatgggatcaaaccagaacccatttgtgactacacaccagcatctggcttcttccca
tactgctccttcaccaatggcgagacttccccaactgtgtccatggcagaactagagcac
cttgcacagaatgtctctaaatcacacctggaaacctgccaatacttgagagaagagctc
cagcagataatgtggcagaccttcctgcaggaggagattgagaactatcaaaacaagcag
cgggaggtgatgtggcaattgtgtgccatcaaaattacagaagctatacagtatgtggta
gagtttgccaaacgcattgatggatttatggaactgtgtcaaaatgatcaaattgtgctt
ctaaaagcaggttctctagaggtggtgtttatcagaatgtgccgtgcctttgactctcag
aacaatgcagtgtactttgatggaaagtatgccagccccgatgtcttcagatccttaggt
tgtgaagactttattagctttgtgtttgaatttggaaagagtttatgttctatgcaccta
actgaagatgaaattgcattattttctgcatttgtactgatgtcagcagatcgctcatgg
ctgcaggaaaaggtaaaaattgaaaaactgcaacagaaaattcagctagctcttcaacac
gtcctacagaagaatcaccgagaagatgggatactaacaaagttaatatgcaaggtgtct
acgttaagagccttatgtggacgacatacagaaaagctaacagcatttaaagcaatatat
ccagacattgtgcgacttcactttcctccattgtacaaggagttgttcacttcagaattt
gagccagcaatgcaaattgatgggtaa
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