Castor canadensis (American beaver): 109689899
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Entry
109689899 CDS
T04791
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04150
mTOR signaling pathway
ccan04310
Wnt signaling pathway
ccan04928
Parathyroid hormone synthesis, secretion and action
ccan05010
Alzheimer disease
ccan05022
Pathways of neurodegeneration - multiple diseases
ccan05200
Pathways in cancer
ccan05224
Breast cancer
ccan05225
Hepatocellular carcinoma
ccan05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109689899
04150 mTOR signaling pathway
109689899
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
109689899
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109689899
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109689899
05226 Gastric cancer
109689899
05224 Breast cancer
109689899
09164 Neurodegenerative disease
05010 Alzheimer disease
109689899
05022 Pathways of neurodegeneration - multiple diseases
109689899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109689899
Membrane trafficking [BR:
ccan04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109689899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
Vgb_lyase
DUF5050
SGL
EGF_LRP2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
109689899
NCBI-ProteinID:
XP_020024568
UniProt:
A0A8B7UYL5
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MAQPFVLTSPGQSQSPDRQPHDLSIDIYSRTLFWTCEATNTINVHRLDGDAVGVVLRGDR
DKPRAIAVNAERGYLYFTNMQDRAAKIERAALDGTEREVLFTAGLIRPVALVVDNTLGKL
FWVDADLKRIESCDLSGANRLTLEDANIVQPVGLAVLGRHLYWIDRQQQMIERVEKTTGG
KRTRVQGRVAHLTGIHAVEEVSLEEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVL
LQNLLTCGEPPTCSPDQFACATGEIDCIPGAWRCDGFPECDDQSDEEGCPVCSAAQFPCA
RGQCVDLRLRCDGEADCQDRSDEADCDAVCLPNQFRCASGQCILIKQQCDSFPDCVDGSD
ELTCEITKPPSDDSPAHSSAIGPVIGIILSLFVMGGVYFVCQRVVCQRYTGASGPFPHEY
VSGTPHVPLNFIAPGGSQHGPFTGISCSKSMMSSVSLVGGRGGVPLYDRNHVTGASSSSS
SSTKATLYPPESGRSPDGELSSRAVHSLGGCRVDGGLHCDPAAYAALGLGGAEEVLLLAR
RTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQ
TLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHP
VMGLMYWTDWGENPKIECANLDGRERHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIE
VINVDGTKRRTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDL
MGLKAVNVAKVFGTNPCADGNGGCSHLCFFTPHATKCSCPIGLELLSDMKTCIVPEAFLV
FTSRAAIHRVSLDTTNNDVAIPLTGVKEASALDFDVSSNHIYWTDVSLKTISRAFMNGSS
VEHVIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVXVWRDLDNPRSLAL
DPTKGYIYWTEWGGKPRIVRAFMDGTNCMTLVDKVGRANDLTIDYTDQRLYWTDLDTNMI
ESSNMLGQDRIVIADDLPHPFGLTQYSDYIYWTDWTLHSIERADKTNGRNRTLIQGHLDF
VMDILVFHSSRQDGLNDCMHSNGQCGQLCLAIPGGHRCGCASHYTLDPSSRNCSPPSTFL
LFSQKCAISRMIPDDQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGRQNIKRAKDDGT
QAGAPVGRLWRSFRPELTLAASRPPPRFLSGEGDH
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggcacagccctttgtgttgacctctccgggccaaagccaaagccccgacaggcagccg
cacgacctcagtatcgacatctacagccggacgctgttctggacgtgcgaggccaccaac
accatcaatgtccacaggctggatggcgacgccgtgggcgtggtgctgcgaggggaccgt
gacaagccgagggccatcgctgtcaatgctgagcgagggtacctgtacttcaccaacatg
caggatcgtgcagccaagattgagcgcgcagccctggatggcacggagcgcgaggtcctc
ttcaccgcaggcctcatccgccctgtggcccttgtggtggacaacacactaggcaagctc
ttctgggtggatgcagacctgaagcgcattgaaagctgtgacctgtcaggggccaaccgc
ctgaccctggaggacgcgaacatcgtgcagcccgtgggcctggctgtgctcggcaggcac
ctctactggattgaccgccagcagcagatgatcgagcgtgtggagaagaccaccgggggc
aagcggactcgtgtccagggccgtgtcgcccacctcacgggcatccatgctgtggaggaa
gtcagcctggaggagttctcagcccacccgtgtgcccgagacaatggcggctgctcccac
atctgcattgcaaagggcgatgggacgccacggtgctcctgcccagtccaccttgtgctc
ctgcagaacctgctgacttgtggcgagcctcccacctgctccccggaccagtttgcgtgt
gctaccggggaaattgattgcatccctggggcctggcgctgtgacggcttccctgagtgc
gatgaccagagcgacgaggagggctgcccggtgtgctcagcagcccagttcccctgtgca
cgtggccagtgtgtggacttgcgtctgcgctgtgacggtgaggctgactgccaggaccgc
tccgacgaagccgactgtgatgctgtctgcctacctaaccagttccggtgtgccagtggc
cagtgcatcctcatcaagcagcaatgtgactccttccccgactgtgtggatggctctgat
gagctcacttgtgaaatcaccaagccgccctctgacgacagtccagcccacagcagtgcc
attgggccagtcatcggtatcatcctctcgctctttgtcatgggcggggtctatttcgtc
tgccagcgtgtggtgtgccagcgctacacaggggccagtggaccctttccacatgagtat
gtcagcgggaccccccatgtgcccctcaatttcatagctccgggcggctcacagcatggt
cccttcacaggcatctcctgcagtaaatccatgatgagctctgtgagcctggtggggggc
cggggcggcgtgcccctctatgacaggaaccacgtcaccggggcctcgtccagcagctcg
tccagcacaaaagccacactgtacccgccggaatctggccgctcgccagatggggaactg
agcagccgggctgttcacagccttggaggctgcagagtggacggcggcctgcactgtgac
ccggctgcctacgcagccctgggcctgggaggggctgaggaggtgctgctgttggcccgg
cggacagacctgcggaggatttctctggacacaccagacttcactgatattgtgctgcag
gtggacgacatccggcatgccattgccatcgactatgaccccctagaggggtatgtgtac
tggacagatgacgaggtgcgggctatccgcagggcatacctggatgggtcaggggcgcag
acactggtcaataccgagatcaacgacccagacggcatcgcggtggactgggtggcccgc
aacctctattggaccgacacaggcaccgaccgcattgaggtgacacgcctcaacggcacc
tctcgcaagatcctcgtgtctgaggacctggacgagccccgagccatcgtgctgcaccct
gtgatgggcctcatgtactggacagactggggagagaatcccaaaatcgagtgtgccaac
ctggacgggcgagagcggcatgtcctggtgaacacgtccctcggatggcccaacggcctg
gccctggacctgcaggagggcaagctgtactggggggacgccaagacagacaaaattgag
gtgatcaatgtggacgggactaagaggcggaccctgctggaggacaagctcccacacatt
tttgggttcacgttgctgggggacttcatctactggacggactggcagcggcgcagcatt
gagcgggtgcacaaggtcaaggccagccgggatgtcatcatcgaccagcttcccgacctg
atggggctcaaagctgtgaacgtggccaaggtctttggaaccaacccgtgcgcagatggg
aacggggggtgcagccacctgtgcttcttcacgccccatgccaccaagtgcagctgcccc
atcggcctggagctgctgagtgacatgaagacctgcattgtccctgaggccttcctggtg
ttcaccagcagagcggccatccatagggtctccctggacaccaccaacaacgatgtggcc
atcccactcacaggtgtcaaggaggcctccgcgctggacttcgacgtgtccagcaaccac
atctactggacggacgtcagcctgaagaccatcagccgagccttcatgaatgggagctca
gtggaacacgtgatcgagtttggccttgactaccctgaaggcatggccgttgactggatg
ggcaagaacctgtactgggctgacactgggaccaacaggattgaggtggcccggctggat
gggcagttccggcaggtcnctgtatggagggacttggacaacccgaggtcgctggccctg
gatcccaccaaaggttacatctactggaccgagtggggtggcaagccaaggattgtgcgg
gccttcatggacggaaccaactgtatgacgctggtggacaaagtgggccgggccaatgac
cttactattgactacactgaccagcgcctctactggactgacctggacaccaacatgatc
gagtcgtccaacatgctgggtcaagaccggatcgtgatcgctgatgacctcccgcacccc
ttcggcctgacacagtacagcgattacatctattggaccgactggactctgcacagcatc
gagcgggctgacaagaccaacggccggaaccgcactctcatccagggccacctggacttc
gtgatggacatcctggtgttccactcctcccgccaggatggcctcaatgactgcatgcac
agcaatggccagtgcgggcagctgtgccttgccatcccaggaggccaccgctgcggctgt
gcttcacactacactctggaccccagtagtcgcaactgcagcccaccctctaccttcttg
ctgttcagccagaaatgtgcaatcagccgcatgatccctgatgaccagcacagcccagac
ctcatccttcccctgcatgggctgaggaacgtcaaggccatcgactacgacccactggac
aagttcatctactgggtggatgggcgtcagaacatcaagcgagccaaggatgatgggacc
caggcaggtgcacctgtgggaaggctgtggcgaagcttccggcctgagcttaccctggcg
gcttccaggccgccaccccgttttctgagcggggagggggaccactga
DBGET
integrated database retrieval system
