Castor canadensis (American beaver): 109690035
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Entry
109690035 CDS
T04791
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan05014
Amyotrophic lateral sclerosis
ccan05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109690035 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
109690035 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109690035 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109690035 (Nup98)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109690035 (Nup98)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109690035 (Nup98)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109690035 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
109690035
NCBI-ProteinID:
XP_020024733
UniProt:
A0A250Y7Z9
LinkDB
All DBs
Position
Unknown
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNTTGGLFGNSQAKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPAGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
SSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIF
GSKPAPGALGTGIGTGFGTALGPGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQPPIALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSEDLASPAEYPENGDRFSFLSKPVDENHQQYGEDDSLVSRFYT
NPIAKPIPQTPESVGNKHNNSNSVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDRE
EAETNAYHIHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKSS
SKKLKTAPLPPEGQTTPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPILD
SVLEESMPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDGDATDQHISHLPSKGD
ISQEICSPRLPISTSHSSKSRSIVGGLLQSKFTSGAFLSPSASVQECRTPRASSLMNISS
TSPWTVPPLLTTVFTVPSPSPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMGR
SFRVGWGPNWTLANTGEQLNGSHELENHQIADSMEYGFLPNPVAIKFLTESPFRVHLEKL
SWRQRKLDEDLQLYQIPLELKLKHSTVHVDELCPLIVPNPGVAVIHDYVDWVKEVSRDLS
EAQIMKPWSLTWTLCEALWGHLKELDSQLDEPSEYIQILERRRAFSRWLSHTAAPQIEEE
VSLTRKDNPVEAVFSYLTGSRISEACSLAQQSGDHRLALLLSQLVGSQPVRELLTMQLAD
WHQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAIHLWYLLPPTAS
ISRALSMYEEAFQNTSEGDRYACSPLPSYLEGSGYLVEEEQDSQRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLENKGL
WEWAVFVLLHIENSSIREKAVRELLTRHCQLLETPESWAKETFLIQKLCVPAEWIHEAKA
VRAHMDSNKHLEALYLFKAGHWNRCHKLIIRHLASDAIINENYDFLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIQVIEMLHHIQQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKDR
LAQSDMAKRVANLLRVVLSLQHAPETTSESTPDPHRVPLRLLAPHIGRLPMPEDYALEEL
RSLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcatttggaaccccctttgggggtggcacaggtggctttggcacaaca
tcaacatttggacaaaatactggctttggtaccactagtggaggggcatttggaacatct
gcatttggttctagcaatactactggaggcttatttggaaactcacaggccaaaccagga
ggattattcggtaccaattcatttagccagccagctacttccacaagcactggttttggg
tttggtacatcaacaggaacatcaaatagcttgtttggaactgcaagcacagggaccagt
cttttctcttcccaaaacaatgcatttgcacaaaataaaccagctggctttgggaatttt
ggaacaagtactagcagtggaggactctttggaactacaaataccacctctaatcctttt
ggtagcacatctggttccctctttgggccaagtagttttacagctgctcctactgggact
accattaaatttaatcctccaactggtacagatactatggtcaaagctggagtgagcact
aacatcagtaccaaacaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggagcttcgtttagaggattatcaggctaaccggaaaggtccacaaaaccaggtggga
gcaggtaccacgactggcttgtttggatcttctccagccacctccagtgcaacaggactc
ttcagctcctccactactaactcaggctttgcatatggtcagaacaaaactgcatttgga
actagtacaactggatttggaacaaatccaggtggtctgtttggccagcagaatcagcag
actaccagtctcttcagcaaaccatttggtcaagccacaaccacacagaacactggcttt
tcctttggtaataccagcactctcggacagccaagcacaaacaccatgggcttatttgga
gtaacccaagcctcacagccagcaggtctttttgggacagctacgaataccagtactggg
acagcatttggaacaggaacaggtctctttgggcagaccaatactgggtttggtgcagtt
agttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggcaccaataccagtgggaatagtattttt
ggaagtaaaccagcacctggagctttgggaactgggattggtacaggatttggaacagct
cttggtcctggacaggcatctttgtttgggaacaatcaacctaagattggagggcctctt
ggtacaggagcttttggggcccctggatttaatactactacagctactttgggctttggc
gccccccagcctccaatagctttgacagaccccaatgcttctgctgcccagcaggctgtt
ctccaacagcacctcaatagtctaacatactcacctttcggagactcccctctcttccgg
aatcccatgtcagatcctaagaagaaagaagagagattgaagccaacaaatccagcagcc
cagaaggctcttaccacacctactcattataaactgacaccacgccctgccaccagagtc
aggccaaaggctttacaaacaacaggcacagcgaaatcacatctctttgatggactggat
gatgatgaaccatccctagccaatggagcattcatgcccaagaaaagcattaagaagtta
gttctgaagaacctgaacaatagcaatctcttttctcctgttaatcgtgattcagaagat
ctagcttcaccagctgaatatccagaaaatggagatagatttagtttcctgagcaaacct
gttgatgaaaaccatcagcaatatggagaggatgattctcttgtgtcacgtttctacact
aaccctattgctaaacccattcctcaaaccccagagagtgttggaaataaacacaataat
agcaacagtgtggatgataccattgttgcattgaacatgcgtgttgctttgcgaaatggg
ctagaaggaagcagtgaagaaacctctttccatgatgagtcactgcaagatgaccgagaa
gaagcagaaactaatgcttatcatatccatccagcaggcattgttctcactaaagttggt
tactatactattccatctatggatgaccttgctaaaattaccaatgaaaaaggagagtgc
attgtttctgacttcactattggtcgtaaaggctatggctcaatctattttgaaggagat
gtgaatttgaccaatttaaacttggatgacattgtgcatatccgaaggaaagaagttatt
gtttacttagatgataaccaaaaaccacctgtgggtgaagggctaaataggaaagctgaa
gttacattggatggagtttggccaacagataaaacatcccgttgtttaatcaagagccct
gatcggcttgctgatatcaactatgagggaagattggaagcagtttcaaggaaacaggga
gctcaattcaaggagtataggcctgaaactggttcttgggtatttaaggtctcccatttt
tctaaatatggccttcaagattctgatgaagaagaggaggaacgtccatctaaaagtagt
tcaaagaagttaaagactgcccctttgcctcctgaaggacagactacccctttccagatg
gctctcaatggcaaaccagcacctccacctcagagccagagcccagaggtggagcagtta
gggagggttgtggaactggacagtgacatggtagatatcacccaggagccaattttggat
tctgtattagaagagagcatgcctgaggatcaggaacctgtgtctgcttcaacacacatt
gcatcttcattgggaattaatccacatgtcttacagatcatgaaagcatcattacttgct
gatgaagaagatggagatgccacggatcaacacattagtcaccttccttccaaaggagat
atttctcaagaaatctgttctcccagactccccatttcaacatcccattcatcaaaatcc
cgctcaatagttggtgggttactacaatcaaaatttacaagtggagcttttctttcacca
agtgcctctgtgcaagaatgtcgaactcccagagcatcatccttaatgaatatctcatcc
acatctccttggactgtccctccactcctgaccactgtatttacagtgcccagcccatct
cctgaggttcagctgaaaacagtgggcacgcgtaggcaaccaggcctagtccctcttgaa
aagtctgtcacatatggcaaggggaaacttttgatggacatggccctgttcatgggacgt
tcatttcgggttggttggggccccaactggactcttgctaataccggagaacagctgaat
ggctctcatgaactggaaaaccatcagattgctgattcgatggaatatggattcctgccc
aatccagtagctattaaatttctaactgagtccccattcagagttcatttggagaaactc
agttggagacaaaggaagctggatgaagacctgcagttataccagatacccttggagctc
aaattaaaacatagcactgtccatgtggatgaactgtgtcctctcattgtccccaatcca
ggagttgctgtcattcatgattatgtagattgggttaaggaagtatccagagatttatca
gaagcacagattatgaaaccctggagcctgacgtggacattatgtgaagccctatggggt
catctgaaggagcttgacagccagctggatgagcccagtgaatacattcagattctggag
cgaagaagagctttttcccgctggctatcccatactgctgcacctcagattgaagaagaa
gtctccttaacccgaaaagacaatcctgtagaggctgtcttcagctacctcacaggcagt
aggatcagcgaggcctgctctctggcacagcagtcaggtgatcaccgccttgcccttctt
ctgtctcagttggtgggtagccagccagtccgggagctactcacgatgcagctggcggat
tggcatcagctgcaggctgactgtttcatccaggatgaacgattgcgcatctttgccctc
ttggctggaaaaccggtgtggcaactatcagagcagaagcaaatcaatgtatgctcccag
ctggactggaaacgttcccttgctatccatctttggtatttgcttccaccaacagcctcc
atttccagggcactcagcatgtatgaagaagcatttcagaatacctctgagggtgacaga
tatgcctgttccccacttccttcatacctggagggttctggctatttggtagaggaggag
caagactcacagagaccacttcaagatgtttgctttcatcttctaaaactctacagtgac
agacattatgatctcaatcaactgctggagcctcgaagcataactgcggatcctttggac
taccgcctaagctggcacttgtgggaggtgctacgggctcttaactacactcatctctca
gagcaatgtgagggtgtgctgcaagctagttacgctggccaactggaaaacaaggggctc
tgggagtgggctgtctttgtcctcctgcatattgaaaactcaagcatacgtgagaaggct
gttcgagagctgcttacccggcactgccagctgttggaaacccctgagtcttgggctaag
gagactttccttattcagaagctttgtgtgcctgctgagtggattcatgaggccaaagca
gtacgagcacacatggactctaataagcacttggaggctctctatttgtttaaagctggt
cactggaatcgctgccacaaacttatcatccggcacttagcttctgatgccatcattaat
gagaactatgacttcctgaaaggtttcttggaagacctggcacctccagagcgcagtagc
ctaattcaggactgggaaacatctgggcttgtttacctggactatattcaagtcattgaa
atgctccaccacattcagcaggtggattgctcaggttatgaactagaacagttacacacc
aaagtgacttcactgtgcaaccggatagagcagatccaatgttataatgccaaggatcgc
ctggctcagtcagacatggccaaacgtgtagccaacttactgcgagtggtactgagccta
cagcatgcccccgaaacaacctctgaatcaacgccagaccctcatcgagtccctttgcgc
ctgttggctccccatattggccggcttcccatgcctgaggactatgccttggaggaactg
cgcagcctcacacagtcttatcttcgagaactgactgttgggagccagtga
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integrated database retrieval system
