Castor canadensis (American beaver): 109690087
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Entry
109690087 CDS
T04791
Symbol
Rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04140
Autophagy - animal
ccan04211
Longevity regulating pathway
ccan05010
Alzheimer disease
ccan05014
Amyotrophic lateral sclerosis
ccan05016
Huntington disease
ccan05017
Spinocerebellar ataxia
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109690087 (Rb1cc1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
109690087 (Rb1cc1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
109690087 (Rb1cc1)
05014 Amyotrophic lateral sclerosis
109690087 (Rb1cc1)
05016 Huntington disease
109690087 (Rb1cc1)
05017 Spinocerebellar ataxia
109690087 (Rb1cc1)
05022 Pathways of neurodegeneration - multiple diseases
109690087 (Rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccan01009
]
109690087 (Rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109690087 (Rb1cc1)
03029 Mitochondrial biogenesis [BR:
ccan03029
]
109690087 (Rb1cc1)
Protein phosphatases and associated proteins [BR:
ccan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109690087 (Rb1cc1)
Membrane trafficking [BR:
ccan04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109690087 (Rb1cc1)
Mitochondrial biogenesis [BR:
ccan03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109690087 (Rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
109690087
NCBI-ProteinID:
XP_020024829
UniProt:
A0A8B7V0V1
LinkDB
All DBs
Position
Unknown
AA seq
1592 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKATFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRMDSLNEHEGSEKAEMKRSTEL
VLSPDMPRTTNTSLTSFHKSVEHVASGAADVESGKEIRESCQSTIQQDETSVDAKDSDLP
FFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIHPFIKECHQTIAKLDNQNMKAI
KGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMI
MLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVVELLER
VKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLF
RKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLL
CDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKASMSQASPQSTSSPRMESAAGI
ATTTSPRTPPPLIVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLD
SLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNT
GGKEDFGDHASLNIQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTAV
EIRNIIEKVKCSLEITLKEKHQKELQTLKSEYEGKLDTLVKESEENEKKIKKLKRDLVCL
EEVLQNKDNEFALVKHEKEAVICMQNEKDQKLLEMENIMQTQNCEIKELKQSRETVLEDL
KKLHVENDEKMELLRAELQRLEQSHLKELEDTLHIRHTQEFEKVMTDHKVSLEKLKQENQ
QRIDQVQEFHATAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESR
AQQKETLKSLLEQETENLRTEISKLNQKLQDNNENYQVGLAELRTLMTIEKDQCISELIS
RHEEESHILKAELDKVTSLHNQAFEIEKNLKEQVIELQSKLDSELSALEKQNDEKITQQE
EKYEAMIQNLNKDKETLVISHERDKEQLIQKLNCEKDEAIQTALKEFKLEREVVENELLE
KIKHLENQIANSSAVESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRT
SLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEK
KKLEEEVSKLRSSSFIPSPHLAVAPELYGACAPELPGETERAAMDIADEGRVDSAMETSM
MSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQ
VGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEK
EYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtcaacactggaactactctaacattcgacactgaactt
acagtgcaaactgtggctgaccttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctggtggtcaatggaggagaatgcatggctgcagatcgaagagtatgc
acctacagtgctgggacggacacaaatccaatttttctttttaacaaagaaatgatctta
tgtgatcgtgcacctgcaattcccaaagctaccttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactgtgttctttttgtgaaggtctggtc
catgatgagcatcttcaacaccaaggctgggctgcgatcatggccaatctggaggactgc
tcaaattcataccaaaagcttcttttcaagtttgaaagcatttattcagattacctgcaa
tccatagaagacatcaaactaaaactcactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagaatg
gattctttaaatgaacatgaaggctcagaaaaggccgagatgaaaagatccactgaactg
gtgctctctcctgatatgcctagaacaactaacacatcgttaacctcatttcataagtca
gtggaacatgtagcttcaggtgccgcagatgtggaaagtggcaaagaaattagagaatct
tgtcaaagtacgatccagcaagatgaaacgtctgtagatgctaaagacagtgatctgcct
ttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtggaa
tctttggtcaggaagtgctttgattctatgagcaggcttgatccaaagattatccaccct
tttataaaagaatgccatcaaactattgccaaacttgataatcagaatatgaaagccatt
aaagggcttgaagataggttgtatgccctggaccagatgatcgctagctgtggccgactg
gtgaatgaacagaaagagctcgctcagggatttttagctaatcagatgagagctgaaaac
ttgaaggatgcatctgtattaccagatttgtgcctgagtcatgcaaatcagttgatgatt
atgttgcaaaatcatagaaaactgttggatattaaacagaaatgtaccactgccaaacaa
gagctagcaaataatctccatgtcagactaaagtggtgttgctttgtgatgcttcatgct
gatcaagatggagagaagttgcaagcattgctccgccttgtagtagagctgctagaaaga
gtcaaaattgtggaagctcttagtacagtccctcagatgtactgcctggctgttgttgaa
gttgtgaggagaaaaatgttcattaaacactacagagaatgggctggtgctttagtaaaa
gatggaaagcgattgtatgaagctgaaaaatccaaaagggaatcctttgggaaattattt
aggaagtcttttttaagaaaccgtctgtttaggggactggactcctggcccccttccttt
tgtactcagaagcctcgaaagtttgactgcgaacttccagatatttcattaaaagattta
cagtttctgcaatcattttgtccttcagaagttcagccattcctcagggtccccttactt
tgtgacttcgaacctctacaccagcatgtacttgccctacataatttggtaaaagcagca
caaagtttggatgaaatgtcccagaccattacagatctactgaatgagcaaaaggcatcc
atgagtcaggcatccccacagtcaacttcttctccaaggatggaaagtgcagcaggaatc
gcaactactacctcaccaagaactcctcctccgctcattgttcaggaccccttatgtcct
gcagtatgtcccttagaagaattatctccagacagcattgatgcacatacatttgatttt
gaaacgatcccccatccaaacatagaacaaactattcatcaagtttctttggacttggat
tcattagcagaaagtcctgagtcagattttatgtctgctgtgaatgagtttgtgatagaa
gaaaatttatcatctcctaatcctataagtgatccacaaagtccagaaatgatggtggaa
tcactttattcatcagtcatcaatgcaatagatagtagacgtatgcaggatacaaacaca
ggtggtaaagaggattttggagatcatgcttctctgaatattcagttggaaaaatgtaga
gttgttgcccaagactctcacttcagtatacaaaccatcaaggaagacctttgtcacttc
agaacatttgtacaaaaagaacagtgtgacttctcaaattctttaaaatgtacagcagtg
gaaataagaaacatcattgaaaaagtaaaatgttccctggaaataacactaaaagaaaaa
catcaaaaagaattacagactttaaaaagtgagtatgaaggtaaacttgacacactagta
aaggagagtgaagaaaatgaaaagaaaattaaaaaattaaaaagagacttagtatgcctt
gaggaggttttacaaaataaagataatgagtttgctttggttaaacatgaaaaagaagct
gtcatctgcatgcaaaatgaaaaggatcagaaactcttagagatggaaaacattatgcag
actcaaaattgtgaaattaaagaactgaagcagtcacgagagacagtgctagaagacttg
aaaaagctccatgttgaaaacgatgagaaaatggagttattgagggcggaacttcagcgc
ttagaacaaagtcacctaaaggaattggaggacaccctacacatcaggcatacgcaggaa
tttgagaaagttatgacggaccacaaagtttccttggagaaattaaagcaggaaaatcaa
caaagaattgatcaagtacaggagtttcatgccacagctattcaggaaaaagaacaacag
ctgcaggaattaaaactcaaggtttctgatttgtcagatatgagatgcaagttagaggtt
gaacttgcattgaaggaagcagaaactgatgagataaaaattttgctggaagagagcaga
gcacaacagaaggagactttgaaatctctccttgaacaagagacggaaaatttgagaaca
gaaataagtaaactaaaccaaaagcttcaagataacaatgaaaattatcaggtaggcctg
gcagagctaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaattagt
agacatgaagaagaatctcatatacttaaagctgaattagacaaagtaacttctttgcat
aaccaagcatttgaaatagaaaaaaacctgaaagaacaggtaattgaattgcagagtaaa
ttggactcagaattgagtgctcttgaaaaacaaaatgatgaaaaaatcacccaacaagag
gagaaatatgaagctatgattcagaacctcaataaagacaaagagactttggttataagc
cacgaacgagacaaagaacagttaattcagaagcttaactgtgaaaaagatgaagctatt
cagactgccctaaaagaatttaaattggagagagaagttgttgaaaatgagttattagaa
aaaattaaacatcttgagaatcaaatagcaaacagttctgccgttgaatctaccagagag
gattcttcaagcttagttgctgaacttcaagaaaagcttcaggaagaaaaagctaagttt
ctagaacaacttgaagagcaagaaaaaagaaagaatgaagaaatgcaaaatgttcgaaca
tctttgattgctgaacaacagaccaattttaacactgttttaacaagagagaaaatgaga
aaagaaaacataataaatgatcttagtgataaattgaaaagtacaatgcagcaacaggag
cgggataaagacttgatagagtcactttctgaagaccgagctcgcttgcttgaagaaaag
aagaagcttgaagaagaagtcagtaagttgcgtagtagcagttttattccttcaccgcat
ttagctgtagccccagaactgtatggagcttgtgcacctgaactcccaggcgagacagaa
agagcagccatggacatagcagacgaaggaagggtggattcagcaatggagacgagcatg
atgtctgtccaagaaaatatccatatgctatctgaagaaaagcagaggataatgctcttg
gaacgaacattacagttgaaagaagaagaaaataagcggttaaatcaaagactgatgtct
cagagcatgtcttctgtgtcttcaaggcattcggaaaagatcgctatcagagattttcag
gtgggagatttggttctcatcatcctagacgagcgccatgacaattacgtgttgtttact
gttagtcctactttgtattttctgcattcagagtctctgccagccctggatctcaaacca
ggtgagggcgcttcaggtgcatctagaagaccctgggtacttgggaaagtaatggaaaag
gaatattgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttt
tacagagtgaaagctgtatcatggaataagaaagtatag
DBGET
integrated database retrieval system
