KEGG   Castor canadensis (American beaver): 109690263
Entry
109690263         CDS       T04791                                 
Name
(RefSeq) symplekin-like
  KO
K06100  symplekin
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03015  mRNA surveillance pathway
ccan04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109690263
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    109690263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccan03021]
    109690263
   03019 Messenger RNA biogenesis [BR:ccan03019]
    109690263
Transcription machinery [BR:ccan03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     109690263
Messenger RNA biogenesis [BR:ccan03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     109690263
    U7-dependent histone pre-mRNA processing factors
     109690263
SSDB
Motif
Pfam: SYMPK_PTA1_N PDS5 Cohesin_HEAT AbiJ_NTD3 Cnd1
Other DBs
NCBI-GeneID: 109690263
NCBI-ProteinID: XP_020025099
UniProt: A0A8B7V1P6
LinkDB
Position
Unknown
AA seq 382 aa
MAAMASSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQ
VQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNML
LRDENVNVVKKAILTMTQLYKVALQWMVKSRVINDLQEACWDMVSAMAGDIILLLDSDND
GIRTHAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALE
QLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSV
RKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTL
KKMKLGELSLGLADGDMGTDPV
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggcagccatggcaagcagcagtggggacagtgtcacccgccggagcgtggcatcacag
tttttcacacaagaggaagggccaggcatcgatggcatgaccacctcagagagggtggtg
gatctcctgaaccaggcagcactgatcaccaatgactcaaagatcacagtgctcaaacag
gtccaggagctgatcatcaacaaagaccccacactcctggacaatttcctagatgagatc
atcgctttccaagcagacaagtccatcgaagtgcgaaagtttgtcatcggcttcatcgag
gaggcatgcaagcgagacattgagttgctgctgaaactgattgccaacctcaacatgctc
ctgagggatgagaatgtgaacgtggtgaagaaggccatcctcaccatgacccagctctac
aaggtggccctgcagtggatggtgaagtcacgggtcatcaatgatctccaggaggcctgc
tgggacatggtatcagccatggctggggacatcatcctgctgttggactctgacaatgat
gggatccgcacacatgccatcaagtttgtagagggtctcattgtcaccctgtcaccccgc
atggctgactcagagataccccggcggcaggagcacgacatcagcctggaccgcatccct
cgtgaccacccctatatccagtataatgtgctgtgggaagaaggcaaggcggccttggag
cagctgctcaagttcatggtgcaccctgccatctcctccatcaacctgaccacggcgctg
ggctcccttgccaatattgcccgccagagacctatgttcatgtctgaggtgatccaggcc
tacgaaacactgcacgccaacctacccccaacactggccaaatctcaggtgagcagcgtg
cgcaagaacctcaagctgcacctgttgagtgtactcaagcaccccgcctccttggagttc
caggctcagatcaccaccctgctggtggacctgggcacgcctcaagctgaaattgcccgc
aacatgcccagtggcaaggatgcccgcaagcggccccgagatgactcggattccacactt
aagaagatgaagctaggtgagctgagtctgggcctggcagatggagacatggggactgac
cctgtttaa

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