Castor canadensis (American beaver): 109690263
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Entry
109690263 CDS
T04791
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03015
mRNA surveillance pathway
ccan04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109690263
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109690263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109690263
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109690263
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109690263
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109690263
U7-dependent histone pre-mRNA processing factors
109690263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
PDS5
Cohesin_HEAT
AbiJ_NTD3
Cnd1
Motif
Other DBs
NCBI-GeneID:
109690263
NCBI-ProteinID:
XP_020025099
UniProt:
A0A8B7V1P6
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MAAMASSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQ
VQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNML
LRDENVNVVKKAILTMTQLYKVALQWMVKSRVINDLQEACWDMVSAMAGDIILLLDSDND
GIRTHAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALE
QLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSV
RKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTL
KKMKLGELSLGLADGDMGTDPV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatggcaagcagcagtggggacagtgtcacccgccggagcgtggcatcacag
tttttcacacaagaggaagggccaggcatcgatggcatgaccacctcagagagggtggtg
gatctcctgaaccaggcagcactgatcaccaatgactcaaagatcacagtgctcaaacag
gtccaggagctgatcatcaacaaagaccccacactcctggacaatttcctagatgagatc
atcgctttccaagcagacaagtccatcgaagtgcgaaagtttgtcatcggcttcatcgag
gaggcatgcaagcgagacattgagttgctgctgaaactgattgccaacctcaacatgctc
ctgagggatgagaatgtgaacgtggtgaagaaggccatcctcaccatgacccagctctac
aaggtggccctgcagtggatggtgaagtcacgggtcatcaatgatctccaggaggcctgc
tgggacatggtatcagccatggctggggacatcatcctgctgttggactctgacaatgat
gggatccgcacacatgccatcaagtttgtagagggtctcattgtcaccctgtcaccccgc
atggctgactcagagataccccggcggcaggagcacgacatcagcctggaccgcatccct
cgtgaccacccctatatccagtataatgtgctgtgggaagaaggcaaggcggccttggag
cagctgctcaagttcatggtgcaccctgccatctcctccatcaacctgaccacggcgctg
ggctcccttgccaatattgcccgccagagacctatgttcatgtctgaggtgatccaggcc
tacgaaacactgcacgccaacctacccccaacactggccaaatctcaggtgagcagcgtg
cgcaagaacctcaagctgcacctgttgagtgtactcaagcaccccgcctccttggagttc
caggctcagatcaccaccctgctggtggacctgggcacgcctcaagctgaaattgcccgc
aacatgcccagtggcaaggatgcccgcaagcggccccgagatgactcggattccacactt
aagaagatgaagctaggtgagctgagtctgggcctggcagatggagacatggggactgac
cctgtttaa
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integrated database retrieval system