Castor canadensis (American beaver): 109690305
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Entry
109690305 CDS
T04791
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109690305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109690305
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109690305
mRNA cycle factors
Common to processing body (P body) and stress granule
109690305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
109690305
NCBI-ProteinID:
XP_020025160
UniProt:
A0A8B7V362
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MRNWMFLQIVIVGENVSFKSQMRTENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLCSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSV
IESLGTDGSPGLKSVLSTGRSLSNSCDPGEKPVVTFKENIKPREVNRDQGRSFPPKEVRR
DYSKGITVTKNDGKKDNSKRKTETKKCTLGKLQETGKQNVAVQVKSQPELRKTPVSEARK
TPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTSLPTQP
TAQSTSQLQVQALAQQQQSPTKAVPTLGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPPLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYW
ESSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPMPRMPFEDPKSSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNSSMFNEVYGKNLTTSSKAELNPSLAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHSHNSAPFSHFGPIGTPDNRDRRPADRWKTDKPAMGGFGIDYL
SATSSSESSWHQASTPSGAWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccgaaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaggtctggaca
tccaggcaggctctgcaggacctgtaccaaaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagctaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccgtgccgtgtgaagtcttcccaattgggaattattagcaat
aaacagacgcataccagcgccatagtgaagccgcagtctagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaagca
gagtcctactataggcacgcagctcagcttgtcccctctaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagatcatctgaccacaattttctactactgcaga
agtatcgctgtgaagttccctttcccagctgcctccactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaaatggggtgtttctgacttcatcaag
gcctttattaaatttcacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaaattggaagaacagtttaagaggctactattccaaaaagctttcaactct
cagcagttagttcatgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgaaacggagcagcatagttatagccaagatgagcagctatgttggacacaatta
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcccctccaaaatgagtct
caggaggagtcctacaatgcctaccccctccctgcagtcaaggtctccatggactggctg
agactcagacctagagtcttccaggaggcagtggtggatgaaagacagtacatttggccc
tggctaatttctcttctgaacagtttccatccgcatgaagaggatctctgcagtacgaat
gctacacctcttccagaggaatttgagttgcaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggccaccagggtattacaggagacaaagaaggtcagcaa
cgacggatacgacagcagcgcttgatctcgataggaaaatggattgctgataatcagcca
cggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaattccagaa
ttaatactggaagaccccagtgaagccaaagagaatctcattctgcaagaaacatctgtg
atagaatcactgggtactgacggaagcccaggactaaagtcagtgctgtctacgggccga
agtctaagcaacagctgtgacccaggagagaaaccagtggtcaccttcaaagagaacatt
aagccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactatagcaaaggaataactgtaactaagaatgatggaaagaaggacaacagcaagagg
aaaactgaaaccaagaaatgcaccttaggaaagttacaggaaacaggaaagcagaatgtg
gcagtgcaggtaaaatctcagccagaactaagaaagactccagtgtctgaagccaggaaa
acacctgtaacacaaaccccaagtcaagcaagtaactcccagttcatccccattcatcac
cctggcgccttccctcctcttcccagccggccagggttcccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaatcaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccag
ggacctcaacaatcacagccaccttcccagcaaccccttacatctttaccaactcagcca
acagcacagtctacaagccagttgcaggttcaagctctagctcagcaacaacaatcccct
acaaaagctgtcccaactttggggaaaagcccacctcaccactctggattccaacagtac
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccactgggg
aaaatcatgcctgtgaaacagccctactaccttcagacccaagaccccataaaactgttt
gagccgccattgcaacctcctgtaatgcagcagcagcctctagagaaaaaaatgaagcct
tttcccatggagccatataaccataatccctcagaagtcaaggtcccagaattctactgg
gaatcttcctacagcatggctgataacagagctgtaatggcacagcaagcaaatatggac
cgcaggggcaaacggtcacccggagtcttccgtccagagcaggatcccatgcccaggatg
ccctttgaggaccccaagagctcccctctgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctg
ctggggcctctcgcctctcttccaggacgaagcctctttaaatccttattggagaagccc
tcagagctcatgtcacattcatcctctttcctgtcccttaccggattctctctcaatcag
gaaagatacccaaatagcagtatgttcaatgaagtatatgggaaaaacctaacaaccagc
tccaaagcagaactcaatccctcattggccccccaggaaacatcactgtactccctgttt
gaagggactccatggtctccatcacttcctgccagttcagatcattctacaccggccagc
cagtctcctcactcctctaacccaagcagcctgcccagctctcctccaacacacagccat
aactctgctccattctctcattttggacccattggaactccagataacagggacagaagg
cctgcagatcggtggaaaactgataagccagccatgggtgggtttggcattgattatctc
tcagcaacatcatcctctgagagcagttggcatcaggccagcactccaagtggtgcctgg
acaggccatggtccctccatggaggattcctctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctctggagcagttgttaatgcag
cagaagcagaaacagcagcggggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system