Castor canadensis (American beaver): 109690379 Help Entry 109690379         CDS       T04791                                  Symbol Ddx39b Name (RefSeq) spliceosome RNA helicase DDX39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism ccan  Castor canadensis (American beaver) Pathway ccan03013   Nucleocytoplasmic transport ccan03015   mRNA surveillance pathway ccan03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccan00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109690379 (Ddx39b)   09122 Translation    03013 Nucleocytoplasmic transport     109690379 (Ddx39b)    03015 mRNA surveillance pathway     109690379 (Ddx39b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccan03019]     109690379 (Ddx39b)    03041 Spliceosome [BR:ccan03041]     109690379 (Ddx39b) Enzymes [BR:ccan01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      109690379 (Ddx39b) Messenger RNA biogenesis [BR:ccan03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      109690379 (Ddx39b) Spliceosome [BR:ccan03041]  Complex C   Other components    EJC/TREX     109690379 (Ddx39b)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     109690379 (Ddx39b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  109690379 NCBI-ProteinID:  XP_020025266 UniProt:  A0A250YHX8 LinkDB All DBs Position Unknown AA seq 428 aa AA seqDB search MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI SSYIEQTR NT seq 1287 nt NT seq  +upstreamnt  +downstreamnt atggcagagaatgatgtggacaatgagctcttggactatgaagatgatgaagtggagact gctgctgggggagatggggctgaggcccctgccaagaaagatgtcaaaggttcttacgtc tccatccacagctctggctttcgtgacttcctgctcaagccagagttgctccgggccatt gttgactgtggctttgagcatccatctgaagtccagcatgagtgcatccctcaggccatt ctgggaatggatgtcctgtgccaggccaagtcaggcatgggaaagacagcagtgtttgta ttggccacactgcaacagttggagccagttactgggcaggtatctgtgctggtgatgtgt cacactcgggagctggcttttcagatcagcaaggaatatgagcgcttctctaaatacatg cccaatgtcaaggttgctgtgttttttggtggtctgtctatcaagaaagatgaagaggtg ctaaagaagaattgcccgcatatcgtcgtggggactcctggccgcatcctagccctggct cgaaacaagagcctcaacctcaaacacattaaacactttatcttggatgaatgtgataag atgcttgaacaactcgacatgcgtcgggatgtccaggaaatttttcgcatgaccccccat gagaagcaggtcatgatgttcagtgctacattgagcaaagagatccggccagtctgccgc aagttcatgcaagatccaatggagatcttcgtggatgatgagacgaagttgacgctgcat gggttgcagcagtactacgtgaaactgaaggacaacgagaagaaccggaagctttttgac cttctagatgtccttgagttcaaccaggtggtgatctttgtgaagtctgtacaacggtgc atcgccctggcccagctcctagtggagcagaatttcccagccattgccatccaccgtgga atgccccaagaagagaggctttctcgatatcagcagttcaaagattttcaacgacgaatt cttgtggctaccaacctgtttggtcgaggcatggacattgagcgggtgaacattgccttc aattatgacatgcctgaggattctgacacctatttgcatcgggtggccagagcaggccgg tttggcaccaaaggcttggctatcacgtttgtgtcagatgagaatgatgccaagattctc aatgatgttcaggaccgctttgaagtcaatattagtgagctgcctgatgagatagacatc tcctcctacattgaacagacacggtag

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